Gene EcSMS35_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4316 
Symbol 
ID6146067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4414732 
End bp4415184 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content47% 
IMG OID641619137 
Producthypothetical protein 
Protein accessionYP_001746261 
Protein GI170681231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0011932 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAA TTCACGAGGT AAAGCTGCAC GCAAAATATT TCGACCTTGT GCTGGAAGGA 
AAGAAACGTG CAGAGTTCCG GAAAAATGAC CGTAATTATG AGCGCGGGGA CACGTTGATT
TTGTATGAAT GGGTGCAGGG TGTGTATACG GGGCGAAATG TTGAAGCCCG GATAACAGAT
GTTACTGACC TGTCAGACTG GCTGGAAGAT TATGTCTTGC TAAGTATTGA GCTGCTTAAT
ACAGGCGCAT ATGAGATTGT GAACTGGAAA GAACTTAGTG AGCGTGGCCT GGTATTCAGA
ATTAATCATG AAATTATGCA TCAGCTCGGC CTTGCTGTTA TGTATGAACC AGAGACGGGG
ATGTCTGGCG GGGCAATGGT TGCCACGGAT GGAGCATGGA ACTATTCAGA TGAACAGATG
GAGCGTGCAC AGCAAAACGG GTGGCTTGGA TAA
 
Protein sequence
MAKIHEVKLH AKYFDLVLEG KKRAEFRKND RNYERGDTLI LYEWVQGVYT GRNVEARITD 
VTDLSDWLED YVLLSIELLN TGAYEIVNWK ELSERGLVFR INHEIMHQLG LAVMYEPETG
MSGGAMVATD GAWNYSDEQM ERAQQNGWLG