| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4313 |
|---|
| Symbol | |
|---|
| ID | 6143958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4411961 |
|---|
| End bp | 4412185 |
|---|
| Gene Length | 225 bp |
|---|
| Protein Length | 74 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641619134 |
|---|
| Product | C4-type zinc finger DksA/TraR family protein |
|---|
| Protein accession | YP_001746258 |
|---|
| Protein GI | 170681432 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02419] phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.927484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.00014767 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACA ACGTAGATTT TATTCAGGAA CAACAGGCTG AATTACTGGA GCGCCAGATT
AACGCGGCAA GGGTAAAACA TTGCGGTGCT TCTGCGCTGG TTTGCGAAGA GTGTGACGCG
CCAATACCTG CTGCCCGTCG TGCGGCTTAT CCGTCAGCCA CGCGTTGTGT TTCCTGTCAG
TCAGTCTTTG AAGCAAAAAA CAAACATTAC CGGAGAACGG CATGA
|
|---|
| Protein sequence | MPDNVDFIQE QQAELLERQI NAARVKHCGA SALVCEECDA PIPAARRAAY PSATRCVSCQ
SVFEAKNKHY RRTA
|
|---|
| |