| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4305 |
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| Symbol | cpxR |
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| ID | 6142971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4407399 |
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| End bp | 4408097 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619126 |
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| Product | DNA-binding transcriptional regulator CpxR |
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| Protein accession | YP_001746250 |
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| Protein GI | 170683339 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0517203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0145886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAAA TCCTGTTAGT TGATGATGAC CGAGAGCTGA CTTCCCTATT AAAGGAGCTG
CTCGAGATGG AAGGCTTCAA CGTGATTGTT GCCCACGATG GGGAACAGGC GCTTGATCTT
CTGGACGACA GCATTGATTT ACTTTTGCTT GATGTAATGA TGCCGAAGAA AAATGGTATC
GACACATTAA AAGCACTTCG CCAGACACAC CAGACGCCTG TCATTATGTT GACGGCGCGC
GGCAGTGAAC TTGATCGCGT TCTCGGCCTT GAGCTGGGCG CAGATGACTA TCTCCCGAAA
CCGTTTAATG ATCGTGAGCT GGTGGCACGT ATTCGCGCGA TCCTGCGCCG TTCGCACTGG
AGCGAGCAAC AGCAAAACAA CGACAACGGT TCACCGACAC TGGAAGTTGA TGCCTTAGTG
CTGAATCCAG GCCGTCAGGA AGCCAGCTTC GACGGGCAAA CGCTGGAGTT AACCGGCACT
GAGTTTACCC TGCTCTATTT GCTGGCACAG CATCTGGGTC AGGTGGTTTC CCGTGAGCAT
TTAAGCCAGG AAGTGCTGGG CAAACGCCTG ACGCCTTTCG ACCGCGCTAT TGATATGCAC
ATTTCCAACC TGCGTCGTAA ACTGCCGGAT CGTAAAGATG GTCATCCGTG GTTTAAAACC
TTGCGTGGTC GCGGCTATCT GATGGTTTCT GCTTCATGA
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| Protein sequence | MNKILLVDDD RELTSLLKEL LEMEGFNVIV AHDGEQALDL LDDSIDLLLL DVMMPKKNGI
DTLKALRQTH QTPVIMLTAR GSELDRVLGL ELGADDYLPK PFNDRELVAR IRAILRRSHW
SEQQQNNDNG SPTLEVDALV LNPGRQEASF DGQTLELTGT EFTLLYLLAQ HLGQVVSREH
LSQEVLGKRL TPFDRAIDMH ISNLRRKLPD RKDGHPWFKT LRGRGYLMVS AS
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