| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4298 |
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| Symbol | rhaT |
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| ID | 6144337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4401919 |
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| End bp | 4402953 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619120 |
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| Product | rhamnose-proton symporter |
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| Protein accession | YP_001746244 |
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| Protein GI | 170683644 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00776] RhaT L-rhamnose-proton symporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.871805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0209281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAACG CGATTACGAT GGGGATATTT TGGCATTTGA TCGGCGCGGC CAGTGCAGCC
TGTTTTTACG CTCCGTTCAA AAAAGTAAAA AAATGGTCAT GGGAAACCAT GTGGTCAGTT
GGTGGGATTG TTTCGTGGAT TATTCTGCCG TGGGCCATCA GCGCCCTGTT ACTGCCGAAT
TTCTGGGCGT ATTACAGCTC GTTTAGTCTC TCTACGCTGC TGCCTGTTTT TCTGTTCGGC
GCTATGTGGG GGATCGGTAA TATCAACTAC GGCCTGACCA TGCGTTATCT CGGCATGTCG
ATGGGAATTG GCATCGCCAT TGGCATTACG TTGATTGTCG GTACGCTGAT GACGCCAATT
ATCAACGGCA ATTTCGATGT TCTGATTAAT ACCGAAGGCG GACGCATGAC GTTGCTCGGC
GTTCTGGTGG CGCTGATTGG CGTAGGGATT GTGACTCGCG CCGGGCAGTT GAAAGAGCGC
AAGATGGGCA TTAAAGCCGA AGAGTTCAAC CTGAAAAAAG GGCTGGTGCT GGCGGTGATG
TGCGGCATTT TCTCTGCCGG GATGTCCTTT GCGATGAACG CCGCAAAACC GATGCATGAA
GCCGCTGCTG CACTGGGCGT CGATCCACTG TATGTCGCTC TGCCAAGCTA TGTTGTCATC
ATGGGAGGCG GCGCGATCAT CAACCTCGGT TTCTGCTTCA TTCGTCTGGC AAAAGTGAAG
GATTTGTCGC TAAAAGCCGA CTTTTCGCTG GCAAAACCGC TAATCATTCA CAACGTGTTA
CTCTCGGCAC TGGGCGGTTT GATGTGGTAT CTGCAATTCT TTTTCTATGC CTGGGGCCAC
GCCCGCATTC CGGCGCAGTA TGACTACATC AGCTGGATGC TGCATATGAG CTTCTATGTA
TTGTGCGGCG GTATCGTCGG GCTGGTGCTG AAAGAGTGGA ACAATGCAGG CCGCCGTCCG
GTAACGGTGT TGAGCCTCGG TTGTGTGGTG ATTATTGTCG CCGCCAACAT CGTCGGCATG
GGCATGGCGA ATTAA
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| Protein sequence | MSNAITMGIF WHLIGAASAA CFYAPFKKVK KWSWETMWSV GGIVSWIILP WAISALLLPN
FWAYYSSFSL STLLPVFLFG AMWGIGNINY GLTMRYLGMS MGIGIAIGIT LIVGTLMTPI
INGNFDVLIN TEGGRMTLLG VLVALIGVGI VTRAGQLKER KMGIKAEEFN LKKGLVLAVM
CGIFSAGMSF AMNAAKPMHE AAAALGVDPL YVALPSYVVI MGGGAIINLG FCFIRLAKVK
DLSLKADFSL AKPLIIHNVL LSALGGLMWY LQFFFYAWGH ARIPAQYDYI SWMLHMSFYV
LCGGIVGLVL KEWNNAGRRP VTVLSLGCVV IIVAANIVGM GMAN
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