| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4295 |
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| Symbol | rhaB |
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| ID | 6144349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4398407 |
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| End bp | 4399876 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619116 |
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| Product | rhamnulokinase |
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| Protein accession | YP_001746240 |
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| Protein GI | 170683095 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | [TIGR02627] rhamnulokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0758535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTC GCAATTGTGT CGCCGTCGAT CTCGGCGCAT CCAGTGGGCG CGTGATGCTG
GCGCGTTACG AGCGTGAATG CCGCAGCCTG ACGCTGCGCG AAATCTATCG TTTTAACAAT
GGCCTGCATA GCCAGAACGG TTATGTCACC TGGGATGTGG ATAGCCTGGA AAGTGCCATT
CGCCTTGGAT TAAACAAGGT GTGCGAGGAA GGGATTCGTA TCGATAGCAT TGGGATTGAT
ACCTGGGGCG TGGACTTTGT GCTGCTCGAC CTACAGGGTA AGCGTGTGGG TCTGCCCGTT
GCTTATCGCG ATAGCCGCAC CAATGGCCTG ATGACGCAGG CACAACAGCA ACTCGGCAAA
CGCGATATTT ATCAGCGTAG CGGCATCCAG TTTCTGCCCT TCAATACGCT TTATCAGTTG
CGTGCGCTGA CGGAGCAACA ACCTGAGCTT ATTCCACACA TTGCTCACGC TCTGCTGATG
CCGGATTACT TCAGTTATCG CCTGACCGGC AAGATGAACT GGGAGTACAC CAACGCCACG
ACCACGCAAC TGGTCAATAT TAATAGCGAC GACTGGGACG AGTCGCTACT GGCGTGGAGC
GGGGCCAACA AAGCCTGGTT TGGTCGCCCG ACGCATCCGG GTAATGTCAT TGGGCACTGG
ATTTGCCCGC AGGGTAATGA GATTCCGGTG GTCGCCGTTG CCAGCCATGA TACCGCCAGC
GCGGTTATCG CCTCGCCGTT AAACGGTTCA CGCGCCGCTT ATCTCTCTTC TGGCACCTGG
TCATTGATGG GCTTCGAAAG CCAGACACCA TTTACCAATG ACACGGCGCT GGCAGCCAAC
ATCACCAATG AAGGCGGGGC GGAAGGTCGC TATCGGGTGC TGAAAAATAT TATGGGCTTA
TGGCTGCTTC AGCGGGTGCT TCAGGAGCGG CAAATCAACG ATCTTCCGGC GCTTATCGCC
GCGACACAGG CACTGCCGGC TTGCCGCTTC ACCATCAATC CCAATGACGA TCGCTTTATT
AATCCTGACG AGATGTGCAG CGAAATTCAG GCTGCGTGTC GGGAAACGGC GCAACCAATC
CCGGAAAGTG ATGCTGAACT GGCGCGCTGT ATTGTCGACA GTCTGGCGCT GCTGTATGCC
GATGTGTTGC ATGAGCTGGC GCAACTGCGC GGTGAAGATT TCTCACAACT GCATATTGTC
GGCGGTGGCT GCCAGAACGC GCTGCTCAAC CAGTTATGTG CTGATGCCTG CGGTATTCGG
GTGATCGCCG GGCCTGTTGA AGCCTCGACG CTCGGCAATA TCGGCATCCA GTTAATGACG
CTGGATGAAC TCAACAATGT GGATGATTTC CGTCAGGTCG TCAGCACCAC CGCGAATCTG
ACCACCTTTA CCCCTAATCC TGACAGTGAA ATTGCCCACT ATGTGGCGCA GATTCACTCT
ACACGACAGA CAAAGGAGCT TTGTGCATGA
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| Protein sequence | MTFRNCVAVD LGASSGRVML ARYERECRSL TLREIYRFNN GLHSQNGYVT WDVDSLESAI
RLGLNKVCEE GIRIDSIGID TWGVDFVLLD LQGKRVGLPV AYRDSRTNGL MTQAQQQLGK
RDIYQRSGIQ FLPFNTLYQL RALTEQQPEL IPHIAHALLM PDYFSYRLTG KMNWEYTNAT
TTQLVNINSD DWDESLLAWS GANKAWFGRP THPGNVIGHW ICPQGNEIPV VAVASHDTAS
AVIASPLNGS RAAYLSSGTW SLMGFESQTP FTNDTALAAN ITNEGGAEGR YRVLKNIMGL
WLLQRVLQER QINDLPALIA ATQALPACRF TINPNDDRFI NPDEMCSEIQ AACRETAQPI
PESDAELARC IVDSLALLYA DVLHELAQLR GEDFSQLHIV GGGCQNALLN QLCADACGIR
VIAGPVEAST LGNIGIQLMT LDELNNVDDF RQVVSTTANL TTFTPNPDSE IAHYVAQIHS
TRQTKELCA
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