| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4294 |
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| Symbol | rhaA |
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| ID | 6143792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4397151 |
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| End bp | 4398410 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619115 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_001746239 |
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| Protein GI | 170680183 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.140419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC AACTGGAACA GGCCTGGGAA CTGGCGAAAC AGCGTTTCGC GGCGGTGGGG
ATTGATGTCG AGGAGGCGCT GCGCCAACTT GATCGTTTAC CCGTTTCAAT GCACTGCTGG
CAGGGCGATG ATGTTTCCGG TTTTGAAAAC CCGGAAGGTT CGCTGACCGG TGGGATTCAG
GCTACTGGTA ATTATCCGGG CAAAGCGCGT AATGCCAGCG AGCTACGTGC CGATCTGGAA
CAAGCTATGC GGCTGATTCC GGGTCCGAAA CGGCTTAATT TACATGCCAT CTATCTGGAA
TCAGACACGC CAGTCTCGCG CGACCAAATC AAACCAGAGC ACTTCAAAAA CTGGGTTGAA
TGGGCGAAAG CCAATCAGCT CGGTCTGGAT TTTAACCCCT CCTGTTTTTC GCATCCGCTA
AGCGCCGATG GCTTTACGCT TTCCCATGCC GACGACAGTA TTCGCCAGTT CTGGATTGAT
CACTGCAAAG CCAGCCGCCG TGTTTCAGCC TATTTTGGCG AGCAACTTGG CACACCGTCG
GTGATGAACA TCTGGATCCC GGATGGCATG AAAGATATCA CCGTTGACCG TCTCGCCCCA
CGTCAGCGTC TGCTGGCAGC ACTGGATGAG GTGATCAGCG AGAAGCTGGA TCCGGCGCAC
CATATCGACG CCGTTGAGAG CAAATTGTTT GGCATTGGCG CGGAGAGCTA CACGGTTGGC
TCCAATGAGT TTTACATGGG GTATGCCACC AGCCGCCAGA CGGCGCTGTG CCTGGACGCC
GGGCATTTCC ACCCGACTGA AGTGATTTCC GACAAGATTT CCGCCGCCAT GCTGTATGTG
CCGCAGTTGC TGCTGCACGT CAGCCGTCCG GTTCGCTGGG ACAGCGATCA CGTAGTGCTG
CTGGATGATG AAACCCAGGC GATTGCCAGT GAGATTGTTC GTCACGATCT GTTTGACCGG
GTACATATCG GCCTGGATTT CTTTGATGCC TCTATCAACC GCATTGCCGC ATGGGTCATT
GGTACGCGCA ATATGAAAAA AGCCCTGCTA CGTGCGTTGC TGGAACCTAC CACTGAACTG
CGCAAGCTGG AAGCAGCGGG CGATTACACC GCACGACTGG CACTGCTGGA AGAACAAAAA
TCATTGCCGT GGCAGGCGGT CTGGGAAATG TATTGCCAAC GTCACGATAC CCCAGTGGGT
AGCGAATGGC TGGAAAGCGT GCGGGCTTAT GAGAAAGCGA TTTTGAGCCA GCGTGGGTAA
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| Protein sequence | MTTQLEQAWE LAKQRFAAVG IDVEEALRQL DRLPVSMHCW QGDDVSGFEN PEGSLTGGIQ
ATGNYPGKAR NASELRADLE QAMRLIPGPK RLNLHAIYLE SDTPVSRDQI KPEHFKNWVE
WAKANQLGLD FNPSCFSHPL SADGFTLSHA DDSIRQFWID HCKASRRVSA YFGEQLGTPS
VMNIWIPDGM KDITVDRLAP RQRLLAALDE VISEKLDPAH HIDAVESKLF GIGAESYTVG
SNEFYMGYAT SRQTALCLDA GHFHPTEVIS DKISAAMLYV PQLLLHVSRP VRWDSDHVVL
LDDETQAIAS EIVRHDLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTTEL
RKLEAAGDYT ARLALLEEQK SLPWQAVWEM YCQRHDTPVG SEWLESVRAY EKAILSQRG
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