| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4293 |
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| Symbol | rhaD |
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| ID | 6145695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4396244 |
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| End bp | 4397068 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619114 |
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| Product | rhamnulose-1-phosphate aldolase |
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| Protein accession | YP_001746238 |
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| Protein GI | 170679635 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.200304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACA TTACCCAGTC CTGGTTTGTC CAGGGAATGA TCAAAGCCAC CACCGACGCC
TGGCTGAAAG GCTGGGACGA GCGCAATGGT GGTAACCTGA CGCTGCGCCT GGATGACGCC
GATATCGCAC CGTATCACGA CAACTTTCAT GCACAACCGC GCTATATCCC GCTCAGCCAG
CCCATGCCTT TACTGGCAAA TACACCGTTT ATTGTCACCG GCTCCGGCAA ATTCTTCCGT
AACGTCCAGC TTGATCCTGC GGCTAACTTA GGCGTCGTAA AAGTCGACAG CGACGGCGCG
GGCTACCATA TTCTCTGGGG GTTAACCAAC GAAGCCGTCC CGACATCCGA ACTTCCGGCG
CACTTCCTCT CTCATTGCGA ACGCATTAAA GCCACCAACG GTAAAGATCG GGTGATCATG
CACTGCCATG CCACCAACCT GATCGCCCTT ACCTACGTAT TGGAAAACGA CACCGCGGTC
TTCACTCGCC AGCTTTGGGA AGGCAGCACC GAGTGTCTGG TAGTGTTCCC GGATGGCGTC
GGCATTTTGC CGTGGATGGT GCCCGGCACC GACGAAATCG GCCAGGCGAC CGCACAGGAA
ATGCAAAAAC ATTCGCTGGT GTTGTGGCCC TTCCACGGCG TCTTCGGCAG CGGTCCGACA
CTGGATGAAA CATTCGGTTT AATCGACACC GCAGAAAAAT CAGCACAAGT ATTAGTGAAG
GTTTATTCGA TGGGCGGCAT GAAACAGACC ATCAGTCGTG AAGAGCTGAT AGCACTCGGC
CAGCGTTTCG GCGTTACACC ACTTGCCAGT GCGCTGGCGC TGTAA
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| Protein sequence | MQNITQSWFV QGMIKATTDA WLKGWDERNG GNLTLRLDDA DIAPYHDNFH AQPRYIPLSQ
PMPLLANTPF IVTGSGKFFR NVQLDPAANL GVVKVDSDGA GYHILWGLTN EAVPTSELPA
HFLSHCERIK ATNGKDRVIM HCHATNLIAL TYVLENDTAV FTRQLWEGST ECLVVFPDGV
GILPWMVPGT DEIGQATAQE MQKHSLVLWP FHGVFGSGPT LDETFGLIDT AEKSAQVLVK
VYSMGGMKQT ISREELIALG QRFGVTPLAS ALAL
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