| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4292 |
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| Symbol | rhaU |
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| ID | 6145191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4395920 |
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| End bp | 4396234 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641619113 |
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| Product | L-rhamnose 1-epimerase |
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| Protein accession | YP_001746237 |
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| Protein GI | 170681510 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3254] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.350342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCGCA AAGCCTTTGT CATGCAGGTT AACCCCGACG CCCACGAAGA GTATCAGCGT
CGGCATAATC CAATCTGGCC GGAACTGGAA GCAGTGTTGA AATCTCACGG TGCGCATAAC
TACGCCATTT ACCTCGACAA AGCGCGTAAT CTGCTGTTTG CCACGGTAGA GATTGAATCT
GAAGAACGGT GGAATGCGGT AGCCAGTACT GATGTTTGCC AACGTTGGTG GAAGTATATG
ACCGACGTTA TGCCAGCTAA CCCGGATAAC AGCCCAGTCA GTAGCGAGCT GCAAGAAGTG
TTTTACCTGC CTTAA
|
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| Protein sequence | MIRKAFVMQV NPDAHEEYQR RHNPIWPELE AVLKSHGAHN YAIYLDKARN LLFATVEIES
EERWNAVAST DVCQRWWKYM TDVMPANPDN SPVSSELQEV FYLP
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