| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4291 |
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| Symbol | rafY2 |
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| ID | 6146426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4394485 |
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| End bp | 4395879 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641619112 |
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| Product | glycoporin RafY |
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| Protein accession | YP_001746236 |
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| Protein GI | 170681010 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.216775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CGACATTATC TTTAGCCATC GGTTTATTAT TGGCATGTAG TACCGGAATG
GCAAAAACAC AGCATTTAAC GCTGGAACAA CGCATGGCAT TGCTGGAAGA ACGCCTGGAA
GCGGCAGAAA TGCGGGCAGC AAAAGCAGAG AGCCAGGTTA AACAGCTGCA GACACAACAA
GCCGCTGAGA TCCGCGAAAT TAAGGCTGCC CAGGGCAATA CGCCGGTAAA TGGACAGGCA
ACGGCGGAAT CTGCAAAGAA AAACTCCACC TCACCTAATC TTTTGCTCTC AGGTTATGGC
GATTTAAAAA TCTACGGCGA CGTAGAATTT AATATGGATG CAGAAAGTAA TCATGGCCTG
CTGGCAATGA CCAACGCTGA TGTGAATAGC GATCCCACTA ATGAACAGTG GAATCTCAAT
GGTCGTATTT TGTTAGGTTT TGATGGTATG CGAAAACTGG ATAATGGCTA TTTCGCCGGG
TTCTCCGCAC AACCGCTGGG GGACATGCAC GGTTCAGTAA ATATCGATGA TGCGGTATTC
TTCTTTGGGA AAGAGAATGA CTGGAAGGTC AAAGTCGGCC GTTTTGAAGC CTACGATATG
TTCCCGCTGA ATCAGGATAC CTTTGTTGAA CATTCCGGTA ATACTGCGAA CGATCTTTAT
GACGATGGCA GCGGTTATAT CTATATGATG AAAGAGGGCC GCGGGCGCTC TAACGCTGGC
GGTAATTTCC TCGTCAGCAA ACAACTTGAT AACTGGTATT TTGAGTTAAA CACGTTACTT
GAAGACGGAA CATCTTTATA TAATGACGGT AATTATCATG GACGCGATAT GGAGCAGCAG
AAAAATGTTG CTTATCTGCG TCCGGTAATT GCCTGGTCGC CGACGGAAGA ATTCACCGTT
TCCGCAGCGA TGGAAGCGAA CGTAGTAAAT AATGCTTATG GTTATACCGA TAGCAAGGGT
AATTTTGTCG ATCAGTCCGA TCGTACCGGC TATGGTATGA GCATGACCTG GAATGGCCTG
AAAACGGATC CGGAAAATGG CGTCGTGGTT AATCTTAATA CCGCCTATTT AGATGCTAAT
AATGAGAAAG ATTTCACTGC CGGGATTAAC GCGCTGTGGA AACGTTTCGA GCTGGGTTAT
ATCTACGCGC ACAATAAGAT TGATGAATTC AGCGGTGTAG TTTGTGATAA CGACTGCTGG
ATTGATGATG AAGGGACGTA CACCATTCAC ACCATTCATG CGTCTTATCA GTTCGCTAAT
GTGATGGATA TGGAGAACTT TAATATTTAC CTCGGGACGT ATTACTCCAT TCTGGATAGC
GACGGTGATA AAAAACACGG TGATGATACT GATGACCGTT ACGGCGCACG CGTTCGCTTT
AAATACTTCT TCTGA
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| Protein sequence | MKKSTLSLAI GLLLACSTGM AKTQHLTLEQ RMALLEERLE AAEMRAAKAE SQVKQLQTQQ
AAEIREIKAA QGNTPVNGQA TAESAKKNST SPNLLLSGYG DLKIYGDVEF NMDAESNHGL
LAMTNADVNS DPTNEQWNLN GRILLGFDGM RKLDNGYFAG FSAQPLGDMH GSVNIDDAVF
FFGKENDWKV KVGRFEAYDM FPLNQDTFVE HSGNTANDLY DDGSGYIYMM KEGRGRSNAG
GNFLVSKQLD NWYFELNTLL EDGTSLYNDG NYHGRDMEQQ KNVAYLRPVI AWSPTEEFTV
SAAMEANVVN NAYGYTDSKG NFVDQSDRTG YGMSMTWNGL KTDPENGVVV NLNTAYLDAN
NEKDFTAGIN ALWKRFELGY IYAHNKIDEF SGVVCDNDCW IDDEGTYTIH TIHASYQFAN
VMDMENFNIY LGTYYSILDS DGDKKHGDDT DDRYGARVRF KYFF
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