Gene EcSMS35_4272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4272 
Symboldtd 
ID6146857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4371623 
End bp4372060 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID641619093 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001746217 
Protein GI170680143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAT TAATTCAACG CGTAACCCGT GCCAGCGTCA CCGTGGAGGG AGAAGTGACG 
GGCGAAATTG GCGCGGGACT TTTGGTGTTA TTGGGTGTCG AAAAGGATGA CGACGAACAG
AAAGCAAACC GTCTGTGCGA GCGTGTGCTC GGCTATCGCA TCTTTAGCGA TGCCGAAGGC
AAGATGAACC TCAACGTGCA ACAGGCGGGC GGCAGTGTGC TGGTGGTTTC CCAGTTTACC
CTCGCCGCAG ATACCGAACG GGGGATGCGT CCAAGTTTCT CCAAAGGTGC ATCACCGGAT
CGCGCAGAGG CGTTATATGA CTATTTCGTC GAACGCTGCC GTCAGCAAGA GATGAACACG
CAAACAGGAC GCTTCGCTGC GGATATGCAG GTATCGCTGG TCAATGATGG CCCCGTGACA
TTCTGGTTGC AGGTATGA
 
Protein sequence
MIALIQRVTR ASVTVEGEVT GEIGAGLLVL LGVEKDDDEQ KANRLCERVL GYRIFSDAEG 
KMNLNVQQAG GSVLVVSQFT LAADTERGMR PSFSKGASPD RAEALYDYFV ERCRQQEMNT
QTGRFAADMQ VSLVNDGPVT FWLQV