Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4271 |
Symbol | rbn |
ID | 6146195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4370754 |
End bp | 4371626 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619092 |
Product | ribonuclease BN |
Protein accession | YP_001746216 |
Protein GI | 170682650 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAA CCATTCAGGA CAAAGCCAGG CACCGTACCC GTCCACTATG GGCCTGGCTA AAACTACTCT GGCAACGCAT TGATGAGGAC AACATGACAA CCCTGGCAGG TAACCTTGCC TATGTGTCGT TGCTCTCATT AGTGCCGCTG GTTGCCGTTG TTTTTGCGCT TTTCGCCGCT TTTCCCATGT TTTCCGACGT CAGCATTCAG TTGCGTCACT TTATTTTTGC CAACTTTCTG CCTGCTACTG GCGATGTTAT TCAGCGGTAT ATCGAACAAT TTGTTGCCAA TTCCAACAAG ATGACCGCCG TTGGGGCGTG CGGGCTGATC GTCACGGCGT TATTGTTGAT GTACTCCATC GATAGCGCGT TGAATACCAT CTGGCGCAGT AAACGAGCGC GACCAAAAAT TTACTCGTTT GCCGTGTACT GGATGATTTT AACGCTGGGG CCGCTGCTGG CAGGGGCCAG TCTGGCGATC AGTTCCTATT TGCTCTCCCT GCGCTGGGCG AGCGATCTCA ATACTGTCAT CGACAACGTG CTGCGTATTT TTCCGCTGCT GTTGTCGTGG ATCTCCTTCT GGTTGCTGTA CAGCATTGTT CCTACCATCC GCGTACCTAA TCGCGACGCG ATTGTCGGCG CGTTTGTCGC CGCACTCCTG TTCGAAGCAG GAAAGAAAGG TTTCGCGCTT TATATCACCA TGTTCCCCTC ATATCAGCTC ATTTACGGTG TGCTGGCGGT GATCCCCATT CTCTTTGTCT GGGTCTACTG GACATGGTGT ATCGTCTTGC TTGGTGCGGA AATTACTGTC ACTCTCGGGG AATACCGCAA ACTAAAACAA GCAGCTGAAC AAGAAGAAGA CGACGAACCA TGA
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Protein sequence | MLKTIQDKAR HRTRPLWAWL KLLWQRIDED NMTTLAGNLA YVSLLSLVPL VAVVFALFAA FPMFSDVSIQ LRHFIFANFL PATGDVIQRY IEQFVANSNK MTAVGACGLI VTALLLMYSI DSALNTIWRS KRARPKIYSF AVYWMILTLG PLLAGASLAI SSYLLSLRWA SDLNTVIDNV LRIFPLLLSW ISFWLLYSIV PTIRVPNRDA IVGAFVAALL FEAGKKGFAL YITMFPSYQL IYGVLAVIPI LFVWVYWTWC IVLLGAEITV TLGEYRKLKQ AAEQEEDDEP
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