Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4270 |
Symbol | yihX |
ID | 6143283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4370161 |
End bp | 4370760 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641619091 |
Product | phosphatase |
Protein accession | YP_001746215 |
Protein GI | 170681999 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTATA TCTTTGATTT AGGTAATGTG ATTGTCGATA TCGACTTTAA CCGTGTGCTG GGAGCCTGGA GCGATTTAAC GCGTGTTCCA CTGGCTACGC TTAAGAAGAG TTTCCACATG GGCGAGGCGT TTCATCAGCA TGAGCGTGGG GAAATTAGCG ACGAAGCGTT CGCAGAGGCG CTGTGTCATG AGATGGCTCT ACCGCTAAGC TACGAGCAGT TCTCTCACGG CTGGCAGGCG GTGTTTGTCG CGCTGCGCCC GGAAGTGATC GCCATCATGC ATAAACTGCG TGAGCAGGGG CATCGCGTGG TGGTGCTTTC CAATACTAAC CGCCTGCATA CTACCTTCTG GCCGGAGGAA TACCCGGAAA TCCGTGATGC TGCTGACCAT ATCTATCTGT CGCAAGATCT GGGGATGCGC AAACCTGAAG CACGAATTTA TCAGCATGTT TTGCAGGCAG AAGGTTTTTC ACCCAGCGAT ACGGTCTTTT TCGACGATAA CGCCGATAAT ATAGAAGGAG CGAATCAGCT AGGCATTACC AGTATTCTGG TGAAAGATAA AACCACCATC CCGGACTATT TCGCGAAGGT GTTATGCTAA
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Protein sequence | MLYIFDLGNV IVDIDFNRVL GAWSDLTRVP LATLKKSFHM GEAFHQHERG EISDEAFAEA LCHEMALPLS YEQFSHGWQA VFVALRPEVI AIMHKLREQG HRVVVLSNTN RLHTTFWPEE YPEIRDAADH IYLSQDLGMR KPEARIYQHV LQAEGFSPSD TVFFDDNADN IEGANQLGIT SILVKDKTTI PDYFAKVLC
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