Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4266 |
Symbol | |
ID | 6147517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4366381 |
End bp | 4367259 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619087 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001746211 |
Protein GI | 170679919 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3684] Tagatose-1,6-bisphosphate aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGT ACACCATCAA CGACATTACG CGTGCATCGG GCGGTTTTGC CATGCTGGCG GTCGATCAGC GCGAAGCCAT GCGCATGATG TTTGCCGCGG CTGGCGCACC CGCTCCAGTA GCCGATAGCG TTTTAACTGA TTTCAAAGTT AACGCCGCGA AGACTCTTTC ACCTTATGCA TCGGCGATTC TGGTAGATCA ACAATTCTGC TACCGCCAGG TGGTTGAGCA AAACGCAATT GCCAAAAGCT GCGCCATGAT CGTCGCTGCC GATGAATTTA TTCCAGGCAA CGGTATTCCG GTGGATAGCG TAGTCATTGA CCGCAAAATC AACCCGCAAC AAATCAAACA AGACGGTGGC AAAGCCTTAA AACTGCTGGT GCTGTGGCGT AGTGATGAAG ATGCGCAGCA ACGCCTGGAT ATGGTGAAAG AGTTCAATGA ACTGTGCCAC TCACACGGTC TGGTGAGCAT CATTGAGCCA GTCGTTCGTC CGCCGCGTCG TGGCGATAAA TTCGATCGCG AACAAGCAAT CATCGATGCA GCCAAAGAGC TGGGTGATAG CGGTGCAGAC CTCTACAAAG TTGAAATGCC GCTTTACGGC AAAGGTCCGC AACAAGAGCT TCTCAGTGCT TCACAACGTT TGAATGACCA TATCAATATG CCGTGGGTGA TCCTCTCTTC CGGTGTCGAC GAAAAACTGT TCCCGCGTGC CGTACGCGTG GCAATGACGG CGGGCGCATC GGGATTCCTT GCAGGCCGTG CAGTCTGGGC ATCGGTCGTC GGTTTACCAG ACAACGAGTT GATGCTGCGT GACGTTTGCG CACCGAAATT ACAACAACTT GGCGATATCG TCGACGAAAT GATGGCTAAA CGCCGTTAA
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Protein sequence | MNKYTINDIT RASGGFAMLA VDQREAMRMM FAAAGAPAPV ADSVLTDFKV NAAKTLSPYA SAILVDQQFC YRQVVEQNAI AKSCAMIVAA DEFIPGNGIP VDSVVIDRKI NPQQIKQDGG KALKLLVLWR SDEDAQQRLD MVKEFNELCH SHGLVSIIEP VVRPPRRGDK FDREQAIIDA AKELGDSGAD LYKVEMPLYG KGPQQELLSA SQRLNDHINM PWVILSSGVD EKLFPRAVRV AMTAGASGFL AGRAVWASVV GLPDNELMLR DVCAPKLQQL GDIVDEMMAK RR
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