Gene EcSMS35_4266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4266 
Symbol 
ID6147517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4366381 
End bp4367259 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID641619087 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_001746211 
Protein GI170679919 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3684] Tagatose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT ACACCATCAA CGACATTACG CGTGCATCGG GCGGTTTTGC CATGCTGGCG 
GTCGATCAGC GCGAAGCCAT GCGCATGATG TTTGCCGCGG CTGGCGCACC CGCTCCAGTA
GCCGATAGCG TTTTAACTGA TTTCAAAGTT AACGCCGCGA AGACTCTTTC ACCTTATGCA
TCGGCGATTC TGGTAGATCA ACAATTCTGC TACCGCCAGG TGGTTGAGCA AAACGCAATT
GCCAAAAGCT GCGCCATGAT CGTCGCTGCC GATGAATTTA TTCCAGGCAA CGGTATTCCG
GTGGATAGCG TAGTCATTGA CCGCAAAATC AACCCGCAAC AAATCAAACA AGACGGTGGC
AAAGCCTTAA AACTGCTGGT GCTGTGGCGT AGTGATGAAG ATGCGCAGCA ACGCCTGGAT
ATGGTGAAAG AGTTCAATGA ACTGTGCCAC TCACACGGTC TGGTGAGCAT CATTGAGCCA
GTCGTTCGTC CGCCGCGTCG TGGCGATAAA TTCGATCGCG AACAAGCAAT CATCGATGCA
GCCAAAGAGC TGGGTGATAG CGGTGCAGAC CTCTACAAAG TTGAAATGCC GCTTTACGGC
AAAGGTCCGC AACAAGAGCT TCTCAGTGCT TCACAACGTT TGAATGACCA TATCAATATG
CCGTGGGTGA TCCTCTCTTC CGGTGTCGAC GAAAAACTGT TCCCGCGTGC CGTACGCGTG
GCAATGACGG CGGGCGCATC GGGATTCCTT GCAGGCCGTG CAGTCTGGGC ATCGGTCGTC
GGTTTACCAG ACAACGAGTT GATGCTGCGT GACGTTTGCG CACCGAAATT ACAACAACTT
GGCGATATCG TCGACGAAAT GATGGCTAAA CGCCGTTAA
 
Protein sequence
MNKYTINDIT RASGGFAMLA VDQREAMRMM FAAAGAPAPV ADSVLTDFKV NAAKTLSPYA 
SAILVDQQFC YRQVVEQNAI AKSCAMIVAA DEFIPGNGIP VDSVVIDRKI NPQQIKQDGG
KALKLLVLWR SDEDAQQRLD MVKEFNELCH SHGLVSIIEP VVRPPRRGDK FDREQAIIDA
AKELGDSGAD LYKVEMPLYG KGPQQELLSA SQRLNDHINM PWVILSSGVD EKLFPRAVRV
AMTAGASGFL AGRAVWASVV GLPDNELMLR DVCAPKLQQL GDIVDEMMAK RR