| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4262 |
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| Symbol | |
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| ID | 6146474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4360441 |
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| End bp | 4361826 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619083 |
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| Product | sugar transporter family protein |
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| Protein accession | YP_001746207 |
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| Protein GI | 170680543 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACA TCACAACGGA AGATCCAGCA ACTTTACGCC TGCCCTTTAA AGAGAAACTC
TCTTACGGTA TTGGCGACCT GGCCTCTAAC ATCCTGCTGG ATATTGGTAC GCTTTATCTT
TTGAAGTTTT ATACCGACGT TCTGGGGCTG CCTGGCACCT ATGGTGGCAT TATCTTTTTG
ATTTCAAAAT TCTTTACTGC GTTTACCGAT ATGGGAACAG GCATCATGCT GGATTCCCGA
CGCAAGATCG GCCCAAAAGG CAAGTTCCGT CCTTTTATTC TGTATGCGTC ATTCCCGGTC
ACCCTGCTGG CGATCGCCAA CTTTATCGGT ACGCCGTTCG ATGTCACCGG TAAAACGGTG
ATGGCCACCA TCCTGTTTAT GCTTTACGGA CTGTTTTTCA GCATGATGAA CTGCTCGTAT
GGCGCGATGG TCCCCGCTAT TACTAAAAAC CCCAACGAAC GTGCATCGCT GGCAGCATGG
CGTCAGGGTG GCGCTACATT AGGCCTGCTG CTGTGTACGG TGGGATTCGT GCCGGTTATG
AATCTTATCG AAGGTAATCA GCAACTTGGC TATATCTTCG CCGCCACGCT GTTTTCACTG
TTCGGCCTGC TGTTTATGTG GATCTGCTAC TCGGGCGTGA AAGAGCGTTA TGTCGAAACC
CAACCTACCA ATCCGGCGCA AAAGCCTGGC TTGTTGCAGT CTTTCCGCGC GATTGCTGGT
AACCGCCCAC TGTTCATTCT GTGTATTGCC AACCTCTGCA CTTTAGGGGC GTTTAACGTC
AAGCTCGCCA TTCAGGTCTA TTACACCCAG TACGTGCTCA ACGATCCCAT CCTGTTGTCA
TATATGGGAT TTTTCAGCAT GGGCTGTATT TTCATCGGCG TGTTCCTGAT GCCCGGCGCA
GTCAGACGTT TTGGTAAGAA GAAGGTCTAT ATCGGCGGCC TGCTGATTTG GGTGCTTGGC
GATCTGCTCA ACTATTTCTT TGGCGGCGGT TCGGTCAGCT TCGTGGCGTT CTCCTGCCTG
GCATTCTTCG GCTCAGCGTT TGTTAACAGC CTGAACTGGG CGCTGGTTTC CGACACCGTC
GAGTACGGCG AGTGGCGCAC CGGTGTGCGT TCGGAAGGTA CGGTCTACAC CGGTTTCACC
TTCTTTCGCA AAGTATCTCA GGCGCTGGCA GGTTTCTTCC CAGGCTGGAT GCTGACGCAA
ATCGGCTATG TGCCAAACGT CGCCCAGGCT GACCACACTA TCGAAGGGTT GCGCCAACTG
ATCTTCATCT ACCCAAGCGC ACTGGCAGTA GTCACCATCG TGGCAATGGG TTGCTTCTAC
AGTCTGAACG AGAAGATGTA CGTCCGCATT GTTGAAGAGA TAGAAGCCCG TAAACGCACG
GCGTAA
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| Protein sequence | MSHITTEDPA TLRLPFKEKL SYGIGDLASN ILLDIGTLYL LKFYTDVLGL PGTYGGIIFL
ISKFFTAFTD MGTGIMLDSR RKIGPKGKFR PFILYASFPV TLLAIANFIG TPFDVTGKTV
MATILFMLYG LFFSMMNCSY GAMVPAITKN PNERASLAAW RQGGATLGLL LCTVGFVPVM
NLIEGNQQLG YIFAATLFSL FGLLFMWICY SGVKERYVET QPTNPAQKPG LLQSFRAIAG
NRPLFILCIA NLCTLGAFNV KLAIQVYYTQ YVLNDPILLS YMGFFSMGCI FIGVFLMPGA
VRRFGKKKVY IGGLLIWVLG DLLNYFFGGG SVSFVAFSCL AFFGSAFVNS LNWALVSDTV
EYGEWRTGVR SEGTVYTGFT FFRKVSQALA GFFPGWMLTQ IGYVPNVAQA DHTIEGLRQL
IFIYPSALAV VTIVAMGCFY SLNEKMYVRI VEEIEARKRT A
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