| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4258 |
|---|
| Symbol | |
|---|
| ID | 6147333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4355899 |
|---|
| End bp | 4356777 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641619079 |
|---|
| Product | AP endonuclease |
|---|
| Protein accession | YP_001746203 |
|---|
| Protein GI | 170682629 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCCTG CTGATTTACT TGATATCGCA AGTGAAAATA ATCTACGTGG CGTCAAAATC
CATGTTCTGG ATGGAGAGCG TTTTTCTCTT GGTAATATGG ACGATAAAGA ACTCTCTGCC
TTTGGGGATA AAGCCCGCCG TCTGAACCTT GATATTCATA TTGAAACCAG CGCCTCAGAT
AAAAAATCTA TTGACGAAGC CGTCGCCATC GCGTTGAAAA CTGGGGCATC CTCCGTACGT
TTTTATCCGC GTTATGAAGG TAATTTGCGC GATGTATTAT CGATTATCGC TAACGACATT
GCCTATGTAC GAGAAACGTA TCAGGACAGC GGCCTGACTT TTACGATCGA ACAGCATGAA
GATTTAAAAA GCCATGAGCT GGTGTCGCTG GTCAAAGAAA GTGAGATGGA ATCTCTTTCC
TTACTGTTTG ATTTTGCGAA CATGATCAAT GCAAATGAGC ATCCCATCGA CGCTTTAAAA
ACGATGGCAC CGCATATTAC CCAGGTCCAT ATCAAAGATG CCTTGATCGT TAAAGAAGAG
GGTGGCCTGG GTCATAAAGC CTGTATTTCA GGTCAGGGTG ATATGCCGTT CAAAGCGTTA
TTAACGCACC TTATCTGCCT GGGTGATGAT GAGCCGCAGG TGACGGCATA TGGCCTGGAA
GAAGAGGTTG ATTACTATGC GCCGGCGTTC CGCTTTGAAG ACGAAGATGA TAATCCGTGG
ATCCCTTATC GCCAGATGAG TGAAACACCA TTGCCAGAAA ATCATTTACT GGATGCGCGG
TTACGTAAAG AAAAAGAAGA TGCAATTAAT CAGATAAATC ATGTGCGTAA CGTACTACAA
CAAATCAAAC AAGAGGCAAA CCATCTTCTG AACCACTAA
|
|---|
| Protein sequence | MLPADLLDIA SENNLRGVKI HVLDGERFSL GNMDDKELSA FGDKARRLNL DIHIETSASD
KKSIDEAVAI ALKTGASSVR FYPRYEGNLR DVLSIIANDI AYVRETYQDS GLTFTIEQHE
DLKSHELVSL VKESEMESLS LLFDFANMIN ANEHPIDALK TMAPHITQVH IKDALIVKEE
GGLGHKACIS GQGDMPFKAL LTHLICLGDD EPQVTAYGLE EEVDYYAPAF RFEDEDDNPW
IPYRQMSETP LPENHLLDAR LRKEKEDAIN QINHVRNVLQ QIKQEANHLL NH
|
|---|
| |