Gene EcSMS35_4257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4257 
Symbol 
ID6142931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4355079 
End bp4355789 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID641619078 
ProductGntR family transcriptional regulator 
Protein accessionYP_001746202 
Protein GI170683114 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.882891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA ATCAATCCAC CGTAGAAAAT GCAAAAGAGA AACTGGATCG GTGGTTGAAA 
GATGGCATCA CCACGCCGGG TGGAAAACTC CCTTCAGAAA GAGAGCTGGG AGAACTGCTG
GGCATTAAAC GTATGACGCT GCGCCAGGCG TTGTTGAACC TCGAGGCAGA ATCCAAAATC
TTCCGTAAGG ATCGTAAGGG GTGGTTCGTG ACCCAGCCGC GATTTAATTA CAGTCCGGAG
CTGTCAGCGA GCTTTCAGCG GGCCGCAATT GAGCAAGGAC GAGAGCCTTC CTGGGGGTTT
ACCGAGAAAA ACCGTACCAG CGATATTCCC GAGACGCTCG CGCCACTGAT TGCAGTGACA
CCATCAACTG AACTCTATCG CATCACCGGC TGGGGGGCGC TGGAAGGACA TAAAGTTTTC
TATCACGAAA CATATATTAA TCCTGAAGTT GCCCCGGGTT TTATTGAACA ACTTGAAAAC
CACTCATTTT CTGCAGTCTG GGAAAAGTGC TACCAAAAAG AGACGGTAGT AAAAAAATTG
ATTTTCAAAC CCGTCAGAAT GCCGGGCGAT ATCAGCAAGT ATCTTGGCGG TTCTGCGGGT
ATGCCAGCGA TCTTAATTGA AAAGCATCGC GCCGACCAGC AGGGCAATAT TGTCCAGATA
GATATTGAAT ATTGGCGATT TGAGGCCGTA GACCTCATCA TTAATCTGTA G
 
Protein sequence
MAENQSTVEN AKEKLDRWLK DGITTPGGKL PSERELGELL GIKRMTLRQA LLNLEAESKI 
FRKDRKGWFV TQPRFNYSPE LSASFQRAAI EQGREPSWGF TEKNRTSDIP ETLAPLIAVT
PSTELYRITG WGALEGHKVF YHETYINPEV APGFIEQLEN HSFSAVWEKC YQKETVVKKL
IFKPVRMPGD ISKYLGGSAG MPAILIEKHR ADQQGNIVQI DIEYWRFEAV DLIINL