Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4248 |
Symbol | engB |
ID | 6144823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4344916 |
End bp | 4345548 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641619069 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_001746193 |
Protein GI | 170683684 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00502662 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0749349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTAATT TGAATTATCA ACAGACGCAT TTTGTGATGA GTGCGCCTGA TATTCGCCAC CTACCTTCCG ATACCGGAAT TGAAGTGGCT TTTGCAGGCC GTTCCAACGC AGGTAAATCC AGCGCGCTGA ACACGCTGAC TAACCAGAAA AGCCTGGCGC GGACCTCAAA AACCCCAGGG CGCACCCAGC TTATCAACCT GTTTGAAGTG GCTGACGGCA AGCGTCTGGT TGACTTGCCT GGGTACGGTT ATGCGGAAGT CCCGGAAGAG ATGAAGCGCA AATGGCAGCG CGCGCTCGGC GAGTACCTCG AAAAACGTCA GAGCCTGCAA GGTCTGGTGG TGCTAATGGA TATTCGCCAT CCGCTGAAAG ATTTGGATCA GCAGATGATT GAGTGGGCGG TAGACAGCAA TATCGCCGTG CTGGTGCTGC TGACCAAAGC GGACAAACTG GCAAGCGGCG CACGTAAAGC GCAATTGAAT ATGGTGCGTG AAGCGGTGCT GGCGTTTAAC GGTGATGTGC AGGTTGAAAC CTTCTCTTCA CTGAAGAAAC AAGGCGTGGA CAAGCTGCGG CAGAAACTGG ATACCTGGTT TAGCGAGATG CAGCCTGTAG AAGAAACGCA GGACGGCGAA TAA
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Protein sequence | MTNLNYQQTH FVMSAPDIRH LPSDTGIEVA FAGRSNAGKS SALNTLTNQK SLARTSKTPG RTQLINLFEV ADGKRLVDLP GYGYAEVPEE MKRKWQRALG EYLEKRQSLQ GLVVLMDIRH PLKDLDQQMI EWAVDSNIAV LVLLTKADKL ASGARKAQLN MVREAVLAFN GDVQVETFSS LKKQGVDKLR QKLDTWFSEM QPVEETQDGE
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