Gene EcSMS35_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4239 
Symbol 
ID6142653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4336852 
End bp4337121 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content45% 
IMG OID641619061 
Producthypothetical protein 
Protein accessionYP_001746185 
Protein GI170681648 
COG category[S] Function unknown 
COG ID[COG3084] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00126371 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.14287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGTA AACGTCTGAA TGAAGTTATT GAACTCCTCC AGCCAGCCTG GCAAAAAGAG 
CCAGACCTTA ACCTGCTGCA ATTTTTGCAG AAACTGGCGA AAGAGTCAGG TTTTGACGGC
GAACTGGCGG ATTTGACGGA TGACATTCTG ATCTATCACC TGAAAATGCG TGATTCCGCG
AAAGATGCGG TGATCCCGGG TTTGCAGAAA GATTATGAAG AAGATTTCAA AACGGCGCTA
TTACGCGCAC GTGGTGTAAT TAAAGAGTAA
 
Protein sequence
MKCKRLNEVI ELLQPAWQKE PDLNLLQFLQ KLAKESGFDG ELADLTDDIL IYHLKMRDSA 
KDAVIPGLQK DYEEDFKTAL LRARGVIKE