Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4231 |
Symbol | hemG |
ID | 6144005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4329654 |
End bp | 4330199 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641619054 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_001746182 |
Protein GI | 170681492 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG4635] Flavodoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000133684 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0229749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACAT TAATTCTTTT CTCAACAAGG GACGGACAAA CGCGCGAGAT TGCCTCCTAC CTGGCTTCGG AACTGAAAGA ACTGGGGATC CAGGCGGATG TCGCCAATGT GCACCGCATT GAAGAACCAC AGTGGGAAAA CTACGACCGT GTGGTCATTG GTGCTTCTAT TCGCTATGGT CACTACCACT CTGCGTTCCA GGAATTTGTC AAAAAGCATG CGACGCGACT GAATTCGATG CCGAGCGCCT TTTACTCCGT AAACCTGGTG GCGCGTAAAC CTGAGAAGCG TACTCCACAG ACCAACAGCT ACGCGCGGAA GTTCCTGATG AGTTCACAAT GGCGTCCCGA TCGCTGCGCG GTCATTGCCG GGGCGCTGCG TTACCCACGT TATCGCTGGT ACGACCGCTT TATGATCAAA CTGATTATGA AGATGTCAGG CGGTGAAACG GATACGCGCA AAGAAGTTGT CTATACCGAT TGGGAGCAGG TGGCGAATTT CGCCCGAGAA ATCGCCCATT TAACCGACAA ACCGACGCTG AAATAA
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Protein sequence | MKTLILFSTR DGQTREIASY LASELKELGI QADVANVHRI EEPQWENYDR VVIGASIRYG HYHSAFQEFV KKHATRLNSM PSAFYSVNLV ARKPEKRTPQ TNSYARKFLM SSQWRPDRCA VIAGALRYPR YRWYDRFMIK LIMKMSGGET DTRKEVVYTD WEQVANFARE IAHLTDKPTL K
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