Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4229 |
Symbol | |
ID | 6142690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4327538 |
End bp | 4328152 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641619052 |
Product | hypothetical protein |
Protein accession | YP_001746180 |
Protein GI | 170681079 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000219511 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.021598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGCT GGATAATTCC TGCGGCACCG GTCACGGTTG TTGAAGAGAT CAAAAAGAGC CGCTTTATAA CGATGTTGGC GCATACCGAT GGCGTTGAGG CGGCGAAAGC GTTTGTTGAA TCGGTGCGGG CAGAACACCC CGATGCCCGC CACCATTGCG TGGCGTGGGT GGCGGGTGCG CCGGATGATT CACAACAGTT GGGTTTCTCT GACGACGGGG AACCGGCGGG AACGGCAGGT AAACCGATGC TCGCCCAACT GATGGGCAGC GGCGTCGGGG AAATTACCGC CGTGGTGGTG CGCTACTACG GCGGCATATT GCTTGGCACC AGTGGGTTAG TGAAAGCGTA TGGCGGCGGC GTGAATCAGG CGCTGCGCCA GCTAACGACC CAACGCAAGA CGCCATTAAC CGAATATACT TTGCAATGTG AATATAGTCA GTTAACCGGC ATTGAAGCGT TGCTGGGGCA GTGTGACGGC AAAATTATCA ACAGTGATTA TCAGGCATTC GTTCTGCTGC GGGTGGCGCT TCCGGCGGCG AAAGTGGCTG AATTTTCCGC AAAGCTGGCG GATTTTAGCC GTGGTTCATT GCAATTGTTA GCGATTGAAG AATAA
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Protein sequence | MESWIIPAAP VTVVEEIKKS RFITMLAHTD GVEAAKAFVE SVRAEHPDAR HHCVAWVAGA PDDSQQLGFS DDGEPAGTAG KPMLAQLMGS GVGEITAVVV RYYGGILLGT SGLVKAYGGG VNQALRQLTT QRKTPLTEYT LQCEYSQLTG IEALLGQCDG KIINSDYQAF VLLRVALPAA KVAEFSAKLA DFSRGSLQLL AIEE
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