Gene EcSMS35_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4229 
Symbol 
ID6142690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4327538 
End bp4328152 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID641619052 
Producthypothetical protein 
Protein accessionYP_001746180 
Protein GI170681079 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000219511 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.021598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCT GGATAATTCC TGCGGCACCG GTCACGGTTG TTGAAGAGAT CAAAAAGAGC 
CGCTTTATAA CGATGTTGGC GCATACCGAT GGCGTTGAGG CGGCGAAAGC GTTTGTTGAA
TCGGTGCGGG CAGAACACCC CGATGCCCGC CACCATTGCG TGGCGTGGGT GGCGGGTGCG
CCGGATGATT CACAACAGTT GGGTTTCTCT GACGACGGGG AACCGGCGGG AACGGCAGGT
AAACCGATGC TCGCCCAACT GATGGGCAGC GGCGTCGGGG AAATTACCGC CGTGGTGGTG
CGCTACTACG GCGGCATATT GCTTGGCACC AGTGGGTTAG TGAAAGCGTA TGGCGGCGGC
GTGAATCAGG CGCTGCGCCA GCTAACGACC CAACGCAAGA CGCCATTAAC CGAATATACT
TTGCAATGTG AATATAGTCA GTTAACCGGC ATTGAAGCGT TGCTGGGGCA GTGTGACGGC
AAAATTATCA ACAGTGATTA TCAGGCATTC GTTCTGCTGC GGGTGGCGCT TCCGGCGGCG
AAAGTGGCTG AATTTTCCGC AAAGCTGGCG GATTTTAGCC GTGGTTCATT GCAATTGTTA
GCGATTGAAG AATAA
 
Protein sequence
MESWIIPAAP VTVVEEIKKS RFITMLAHTD GVEAAKAFVE SVRAEHPDAR HHCVAWVAGA 
PDDSQQLGFS DDGEPAGTAG KPMLAQLMGS GVGEITAVVV RYYGGILLGT SGLVKAYGGG
VNQALRQLTT QRKTPLTEYT LQCEYSQLTG IEALLGQCDG KIINSDYQAF VLLRVALPAA
KVAEFSAKLA DFSRGSLQLL AIEE