| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4223 |
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| Symbol | tatD |
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| ID | 6147310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4318790 |
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| End bp | 4319572 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619045 |
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| Product | DNase TatD |
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| Protein accession | YP_001746173 |
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| Protein GI | 170684158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00421208 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGATA TCGGCGTTAA TTTGACCAGT TCGCAATTTG CGAAAGACCG TGATGATGTT
GTAGCGCGCG CTTTTGACGC GGGAGTTAAT GGGCTACTCA TCACCGGCAC TAACCTGCGT
GAAAGCCAGC ATGCGCAAAA GCTGGCGCGT CAGTATTCGT CCTGTTGGTC AACGGCGGGC
GTACATCCTC ACGACAGCAG CCAGTGGCAA GCTGCGACTG AAGAAGCGAT TATTGAGCTG
GCCGCGCAGC CAGAAGTGGT GGCGATTGGT GAATGTGGTC TCGACTTTAA CCGCAACTTT
TCGACGCCGG AAGAGCAGGA ACGCGCTTTT GTTGCCCAGC TACGCATTGC CGCAGAATTA
AACATGCCGG TATTTATGCA CTGTCGCGAT GCCCACGAGC GGTTTATGAC ATTGCTGGAG
CCGTGGCTGG ATAAACTGCC TGGTGCGGTT CTTCATTGCT TTACCGGCAC ACGCGAAGAG
ATGCAGGCGT GCGTGGCGCG TGGAATTTAT ATCGGCATTA CCGGTTGGGT TTGCGATGAA
CGACGCGGGC TGGAGCTGCG GAAATTGTTG CCGTTGATTC CGGCGGAGAA ATTGCTGATC
GAAACTGATG CGCCGTATCT GCTCCCGCGC GATCTCACGC CGAAACCATC ATCCCGGCGC
AACGAGCCAG CCCATCTGCC CCATATTTTG CAACGTATTG CGCACTGGCG TGGAGAAGAT
GCCGCATGGC TGGCTGCCAC CACGGATGCC AATGTTAAAA CACTGTTTGG GATTGCGTTT
TAG
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| Protein sequence | MFDIGVNLTS SQFAKDRDDV VARAFDAGVN GLLITGTNLR ESQHAQKLAR QYSSCWSTAG
VHPHDSSQWQ AATEEAIIEL AAQPEVVAIG ECGLDFNRNF STPEEQERAF VAQLRIAAEL
NMPVFMHCRD AHERFMTLLE PWLDKLPGAV LHCFTGTREE MQACVARGIY IGITGWVCDE
RRGLELRKLL PLIPAEKLLI ETDAPYLLPR DLTPKPSSRR NEPAHLPHIL QRIAHWRGED
AAWLAATTDA NVKTLFGIAF
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