Gene EcSMS35_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4216 
SymbolubiE 
ID6146919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4314091 
End bp4314846 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content52% 
IMG OID641619039 
Productubiquinone/menaquinone biosynthesis methyltransferase 
Protein accessionYP_001746167 
Protein GI170682083 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00227535 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGATA AGTCACAAGA AACGACGCAC TTTGGTTTTC AGACCGTCGC GAAGGAACAA 
AAAGCGGATA TGGTCGCTCA CGTTTTCCAT TCCGTGGCAT CAAAATACGA TGTCATGAAT
GATTTGATGT CATTCGGTAT TCATCGTTTG TGGAAGCGAT TCACGATTGA TTGCAGCGGC
GTACGCCGTG GGCAGACCGT GCTGGATCTG GCTGGTGGCA CCGGCGACCT GACAGCGAAA
TTCTCCCGCC TGGTCGGAGA AACTGGCAAA GTGGTCCTTG CTGATATCAA TGAATCCATG
CTCAAAATGG GACGCGAGAA GCTGCGTAAT ATCGGTGTGA TTGGCAACGT TGAGTATGTT
CAAGCGAACG CTGAGGCGCT GCCGTTCCCG GATAACACCT TTGATTGCAT CACCATTTCG
TTTGGTCTGC GTAACGTCAC CGACAAAGAT AAAGCACTGC GTTCAATGTA TCGCGTGCTG
AAACCCGGCG GCCGCCTGCT GGTGCTTGAG TTCTCGAAGC CAATTATCGA GCCGCTGAGC
AAAGCCTATG ATGCATACTC CTTCCATGTG CTGCCGCGTA TTGGCTCACT GGTCGCGAAC
GACGCCGACA GCTACCGTTA TCTGGCAGAA TCCATCCGTA TGCATCCCGA TCAGGATACC
CTGAAAGCCA TGATGCAGGA TGCCGGATTC GAAAGTGTCG ACTACTACAA TCTGACGGCA
GGGGTTGTGG CGTTGCATCG TGGTTATAAG TTCTGA
 
Protein sequence
MVDKSQETTH FGFQTVAKEQ KADMVAHVFH SVASKYDVMN DLMSFGIHRL WKRFTIDCSG 
VRRGQTVLDL AGGTGDLTAK FSRLVGETGK VVLADINESM LKMGREKLRN IGVIGNVEYV
QANAEALPFP DNTFDCITIS FGLRNVTDKD KALRSMYRVL KPGGRLLVLE FSKPIIEPLS
KAYDAYSFHV LPRIGSLVAN DADSYRYLAE SIRMHPDQDT LKAMMQDAGF ESVDYYNLTA
GVVALHRGYK F