| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4216 |
|---|
| Symbol | ubiE |
|---|
| ID | 6146919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4314091 |
|---|
| End bp | 4314846 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641619039 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_001746167 |
|---|
| Protein GI | 170682083 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00227535 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGATA AGTCACAAGA AACGACGCAC TTTGGTTTTC AGACCGTCGC GAAGGAACAA
AAAGCGGATA TGGTCGCTCA CGTTTTCCAT TCCGTGGCAT CAAAATACGA TGTCATGAAT
GATTTGATGT CATTCGGTAT TCATCGTTTG TGGAAGCGAT TCACGATTGA TTGCAGCGGC
GTACGCCGTG GGCAGACCGT GCTGGATCTG GCTGGTGGCA CCGGCGACCT GACAGCGAAA
TTCTCCCGCC TGGTCGGAGA AACTGGCAAA GTGGTCCTTG CTGATATCAA TGAATCCATG
CTCAAAATGG GACGCGAGAA GCTGCGTAAT ATCGGTGTGA TTGGCAACGT TGAGTATGTT
CAAGCGAACG CTGAGGCGCT GCCGTTCCCG GATAACACCT TTGATTGCAT CACCATTTCG
TTTGGTCTGC GTAACGTCAC CGACAAAGAT AAAGCACTGC GTTCAATGTA TCGCGTGCTG
AAACCCGGCG GCCGCCTGCT GGTGCTTGAG TTCTCGAAGC CAATTATCGA GCCGCTGAGC
AAAGCCTATG ATGCATACTC CTTCCATGTG CTGCCGCGTA TTGGCTCACT GGTCGCGAAC
GACGCCGACA GCTACCGTTA TCTGGCAGAA TCCATCCGTA TGCATCCCGA TCAGGATACC
CTGAAAGCCA TGATGCAGGA TGCCGGATTC GAAAGTGTCG ACTACTACAA TCTGACGGCA
GGGGTTGTGG CGTTGCATCG TGGTTATAAG TTCTGA
|
|---|
| Protein sequence | MVDKSQETTH FGFQTVAKEQ KADMVAHVFH SVASKYDVMN DLMSFGIHRL WKRFTIDCSG
VRRGQTVLDL AGGTGDLTAK FSRLVGETGK VVLADINESM LKMGREKLRN IGVIGNVEYV
QANAEALPFP DNTFDCITIS FGLRNVTDKD KALRSMYRVL KPGGRLLVLE FSKPIIEPLS
KAYDAYSFHV LPRIGSLVAN DADSYRYLAE SIRMHPDQDT LKAMMQDAGF ESVDYYNLTA
GVVALHRGYK F
|
|---|
| |