| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4208 |
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| Symbol | udp |
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| ID | 6147358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4306115 |
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| End bp | 4306879 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619031 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_001746159 |
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| Protein GI | 170683788 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000492697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCAAGT CTGATGTTTT TCATCTCGGC CTCACTAAAA ACGATTTACA AGGGGCTACG
CTTGCCATCG TCCCTGGCGA CCCGGATCGT GTGGAAAAGA TCGCCGCGCT GATGGATAAG
CCGGTTAAGC TGGCATCTCA TCGCGAATTC ACCACCTGGC GTGCAGAGCT GGATGGTAAA
CCTGTTATCG TCTGCTCTAC CGGTATCGGC GGCCCGTCTA CCTCTATTGC TGTTGAAGAG
CTGGCACAGC TGGGCATTCG CACCTTCCTG CGTATCGGCA CAACAGGCGC TATTCAGCCG
CATATTAATG TTGGCGATGT CCTGGTTACC ACGGCGTCTG TTCGTCTGGA TGGTGCGAGC
CTGCACTTCG CACCGCTGGA ATTCCCGGCT GTCGCTGATT TCGAATGTAC GACTGCGCTG
GTTGAAGCGG CGAAGTCAAT TGGTGCCACC ACTCACGTTG GTGTGACGGC TTCTTCTGAT
ACCTTCTACC CGGGTCAGGA ACGTTACGAT ACTTACTCTG GTCGCGTAGT TCGTCACTTT
AAAGGTTCTA TGGAAGAGTG GCAGGCGATG GGCGTAATGA ACTATGAAAT GGAATCTGCA
ACCCTGCTGA CCATGTGTGC AAGTCAGGGC CTGCGTGCCG GTATGGTAGC GGGGGTTATC
GTTAACCGCA CCCAGCAAGA GATCCCGAAT GCTGAGACGA TGAAACAAAC CGAAAGCCAT
GCGGTGAAAA TCGTGGTGGA AGCGGCGCGT CGTCTGCTGA AATAA
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| Protein sequence | MSKSDVFHLG LTKNDLQGAT LAIVPGDPDR VEKIAALMDK PVKLASHREF TTWRAELDGK
PVIVCSTGIG GPSTSIAVEE LAQLGIRTFL RIGTTGAIQP HINVGDVLVT TASVRLDGAS
LHFAPLEFPA VADFECTTAL VEAAKSIGAT THVGVTASSD TFYPGQERYD TYSGRVVRHF
KGSMEEWQAM GVMNYEMESA TLLTMCASQG LRAGMVAGVI VNRTQQEIPN AETMKQTESH
AVKIVVEAAR RLLK
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