| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4190 |
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| Symbol | rhtC |
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| ID | 6145038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4289068 |
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| End bp | 4289688 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641619013 |
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| Product | threonine efflux system |
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| Protein accession | YP_001746141 |
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| Protein GI | 170683014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00587316 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTGATGT TATTCCTCAC CGTCGCCATG GTGCACATTG TGGCGCTTAT GAGCCCCGGT
CCCGATTTCT TTTTTGTCTC TCAGACCGCT GTCAGTCGTT CCCGTAAAGA AGCGATGATG
GGCGTGCTGG GCATTACCTG CGGCGTAATG GTTTGGGCTG GGATTGCGTT GCTTGGCCTA
CATTTGATTA TCGAAAAAAT GGCCTGGCTG CATACGCTGA TTATGGTGGG CGGTGGCCTG
TATCTCTGCT GGATGGGTTA CCAGATGCTA CGCGGTGCAC TGAAAAAAGA GGCGGTTTCT
GCGCCTGCAC CACAGGTTGA GCTGGCAAAA AGCGGGCGCA GTTTCCTGAA AGGCTTACTG
ACCAATCTCG CCAATCCGAA AGCGATTATC TACTTTGGTT CGGTATTCTC GCTGTTTGTC
GGCGATAACG TCGGCACCAC TGAGCGCTGG GGCATTTTCG CGTTGATTAT TATCGAAACA
CTGGCGTGGT TTACCGTCGT TGCCAGCCTG TTTGCCCTGC CGCAAATGCG CCGTGGTTAT
CAACGTCTGG CGAAGTGGAT TGATGGTTTT GCCGGGGCGT TATTTGCCGG ATTTGGCATT
CATTTGATTA TTTCGCGTTG A
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| Protein sequence | MLMLFLTVAM VHIVALMSPG PDFFFVSQTA VSRSRKEAMM GVLGITCGVM VWAGIALLGL
HLIIEKMAWL HTLIMVGGGL YLCWMGYQML RGALKKEAVS APAPQVELAK SGRSFLKGLL
TNLANPKAII YFGSVFSLFV GDNVGTTERW GIFALIIIET LAWFTVVASL FALPQMRRGY
QRLAKWIDGF AGALFAGFGI HLIISR
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