Gene EcSMS35_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4187 
Symbol 
ID6142783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4285549 
End bp4286016 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID641619010 
Producthypothetical protein 
Protein accessionYP_001746138 
Protein GI170679742 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0132794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG TACTGACCGC TGAACAAGCC CTGAAATTAG TGGGTGAGAT GTTTGTTTAT 
CACATGCCGT TTAACCGCGC ATTGGGGATG GAACTGGAGC GTTACGAAAA AGAGTTCGCA
CAGCTGGCCT TTAAAAATCA GCCAATGATG GTGGGTAACT GGGCGCAAAG CATTTTGCAC
GGCGGGGTCA TTGCGTCGGC GCTGGATGTC GCCGCCGGTC TGGTGTGCGT GGGAAGTACC
TTAACCCGCC ACGAAACCAT CAGTGAAGAT GAACTACGCC AGCGGCTATC GCGGATGGGG
ACCATTGATC TTCGCGTCGA TTATCTGCGC CCAGGCAGAG GCGAGCGTTT TACTGCTACC
AGTAGCCTGT TACGTGCAGG CAATAAAGTC GCCGTCGCCC GCGTTGAATT ACACAATGAA
GAACAGCTTT ATATTGCCAG TGCCACCGCC ACCTATATGG TAGGTTGA
 
Protein sequence
MSAVLTAEQA LKLVGEMFVY HMPFNRALGM ELERYEKEFA QLAFKNQPMM VGNWAQSILH 
GGVIASALDV AAGLVCVGST LTRHETISED ELRQRLSRMG TIDLRVDYLR PGRGERFTAT
SSLLRAGNKV AVARVELHNE EQLYIASATA TYMVG