| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4181 |
|---|
| Symbol | |
|---|
| ID | 6145574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4280835 |
|---|
| End bp | 4281599 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641619004 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001746132 |
|---|
| Protein GI | 170680837 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3698] Predicted periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0140439 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATC GGCTACTCAT TGGTAAAGGA ATGATCACCT TGAATCTCAA ACGGATTTTT
CTCACCTTCA CCTTACTTCC CTTGTTTGCT GTTGCCGCTG ATGATTGCGC ACTCTCAGAT
CCGACGCTGA CCGTACAGGC GTATACCGTT AATCCTCAAA CAGAGCGGGT GAAAATGTAC
TGGCAAAAAG CCAATGGCGA AGCGTGGGGA ACGTTACATG CTCTGCTGGC GGATATGAAT
AGTCAGGGTC AGGTGCAGAT GGCGATGAAC GGCGGCATCT ATGATGAAAG CTATGCGCCG
CTCGGTTTGT ACATCGAAAA CGGTCAGCAG AAGGTGGCGT TAAATCTCGC TTCAGGTGAA
GGGAATTTCT TTATTCGTCC TGGCGGCGTG TTTTATGTCG CGGGAGATAA AGTCGGCATC
GTTCGTCTGG ATGCCTTTAA AACCAGTAAA GAGATTCAGT TTGCAGTGCA GTCAGGGCCA
ATGTTATTAG AAAACGGCGT AATTAATCCA CGCATTCACC CGAATGTTGC CTCGCGTAAA
ATTCGTAACG GTGTAGGGAT TAATAAACAA GGGAACGCCG TGTTTTTGTT GAGCCAGCAG
GCGACAAATT TTTATGATTT TGCCTGCTAT GCCAAAGCGA AACTGAACGT TGAGCAGCTG
CTTTATCTTG ATGGCACAAT TTCACATATG TATATGAAAG GCTGGGCAAT CCCGTGGCAA
CACTATCCTT TTGTTACCAT GATTTCCGTC GAGTGGAAAG GTTAA
|
|---|
| Protein sequence | MAHRLLIGKG MITLNLKRIF LTFTLLPLFA VAADDCALSD PTLTVQAYTV NPQTERVKMY
WQKANGEAWG TLHALLADMN SQGQVQMAMN GGIYDESYAP LGLYIENGQQ KVALNLASGE
GNFFIRPGGV FYVAGDKVGI VRLDAFKTSK EIQFAVQSGP MLLENGVINP RIHPNVASRK
IRNGVGINKQ GNAVFLLSQQ ATNFYDFACY AKAKLNVEQL LYLDGTISHM YMKGWAIPWQ
HYPFVTMISV EWKG
|
|---|
| |