| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4179 |
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| Symbol | uvrD |
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| ID | 6144651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4277633 |
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| End bp | 4279795 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641619002 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001746130 |
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| Protein GI | 170679582 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.654606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0232596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTTT CTTACCTGCT CGACAGCCTT AATGACAAAC AGCGCGAAGC GGTGGCCGCG
CCACGCAGCA ACCTTCTGGT GCTGGCGGGC GCGGGCAGTG GTAAGACGCG CGTACTGGTG
CATCGTATCG CCTGGCTGAT GAGCGTGGAA AACTGCTCGC CATACTCGAT TATGGCGGTA
ACGTTTACCA ACAAAGCGGC GGCGGAGATG CGTCATCGTA TCGGGCAGCT GATGGGCACC
AGCCAGGGCG GCATGTGGGT CGGCACCTTC CACGGGCTGG CGCACCGTCT GCTGCGTGCG
CACCATATGG ACGCCAATCT GCCGCAGGAT TTTCAGATCC TCGACAGCGA GGACCAGCTA
CGCCTGCTCA AACGCCTAAT CAAGGCGATG AACCTCGACG AGAAGCAGTG GCCGCCGCGC
CAGGCAATGT GGTACATCAA CAGCCAGAAA GATGAAGGCC TGCGTCCACA TCATATTCAA
AGCTACGGTA ATCCGGTGGA GCAGACCTGG CAGAAGGTGT ATCAGGCGTA TCAGGAAGCG
TGTGACCGCG CGGGGCTGGT GGACTTCGCC GAGCTGCTGC TACGTGCTCA CGAGTTGTGG
CTTAACAAGC CGCATATCCT TCAGCACTAT CGCGAACGGT TTACCAATAT CCTGGTGGAC
GAATTCCAGG ATACCAACAA CATTCAGTAT GCGTGGATCC GCCTGCTGGC GGGCGATACC
GGCAAAGTGA TGATCGTTGG CGATGACGAT CAGTCAATCT ACGGCTGGCG CGGAGCGCAG
GTGGAGAATA TTCAGCGTTT CCTCAATGAT TTCCCCGGTG CTGAAACTAT CCGTCTGGAG
CAGAACTACC GCTCTACCAG CAATATTCTG AGCGCCGCGA ACGCCCTGAT TGAAAACAAC
AACGGGCGTT TGGGTAAAAA ACTGTGGACC GATGGCGCGG ATGGTGAGCC TATTTCCCTC
TATTGCGCTT TTAACGAACT CGATGAAGCG CGTTTTGTGG TTAACCGTAT CAAAACCTGG
CAGGACAACG GCGGGGCGCT TGCCGAGTGC GCCATTCTCT ACCGCAGCAA CGCCCAGTCG
CGTGTGCTGG AAGAAGCACT GTTACAGGCA AGTATGCCGT ACCGTATTTA CGGCGGGATG
CGATTCTTCG AACGCCAGGA AATCAAAGAT GCGCTCTCGT ATCTGCGCCT GATTGCCAAC
CGTAATGACG ACGCGGCCTT TGAGCGCGTG GTGAATACAC CAACGCGGGG TATTGGTGAC
CGGACGCTGG ACGTGGTACG TCAGACATCG CGTGATCGCC AGTTAACACT CTGGCAGGCA
TGTCGTGAAC TGTTGCAGGA AAAAGCCCTC GCCGGACGTG CTGCCAGTGC CTTACAGCGG
TTTATGGAGC TGATCGACGC CTTAGCGCAG GAAACTGCCG ATATGCCGCT GCATGTACAG
ACTGACCGGG TAATTAAAGA CTCCGGCTTG CGCACCATGT ACGAGCAGGA GAAGGGCGAA
AAAGGTCAGA CGCGTATCGA AAACCTGGAG GAACTGGTGA CGGCAACGCG CCAGTTCAGC
TACAACGAAG AAGACGAAGA TTTAATGCCG CTGCAGGCAT TCCTCTCCCA TGCGGCGCTG
GAAGCGGGCG AGGGGCAGGC GGATACCTGG CAGGACGCGG TGCAGTTGAT GACGCTACAC
TCGGCGAAAG GCCTGGAGTT CCCGCAGGTG TTTATCGTTG GTATGGAAGA GGGCATGTTC
CCAAGCCAGA TGTCGCTGGA TGAAGGCGGA CGTCTGGAAG AAGAACGCCG TCTGGCCTAC
GTTGGCGTAA CCCGCGCGAT GCAGAAACTG ACGCTGACCT ACGCGGAAAC TCGCCGTCTG
TATGGCAAAG AGGTTTACCA TCGCCCGTCG CGCTTTATCG GTGAGTTGCC GGAAGAGTGT
GTGGAAGAGG TGCGCCTGCG CGCTACGGTA AGCCGCCCGG TCAGCCATCA ACGGATGGGT
ACGCCGATGG TCGAGAACGA CAGCGGCTAC AAGCTCGGCC AGCGCGTACG CCACGCTAAG
TTTGGTGAAG GCACCATCGT CAATATGGAA GGCAGCGGCG AGCATAGCCG TTTGCAGGTG
GCATTCCAGG GCCAGGGTAT TAAATGGCTG GTGGCGGCTT ATGCCCGACT GGAGACGGTG
TAA
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| Protein sequence | MDVSYLLDSL NDKQREAVAA PRSNLLVLAG AGSGKTRVLV HRIAWLMSVE NCSPYSIMAV
TFTNKAAAEM RHRIGQLMGT SQGGMWVGTF HGLAHRLLRA HHMDANLPQD FQILDSEDQL
RLLKRLIKAM NLDEKQWPPR QAMWYINSQK DEGLRPHHIQ SYGNPVEQTW QKVYQAYQEA
CDRAGLVDFA ELLLRAHELW LNKPHILQHY RERFTNILVD EFQDTNNIQY AWIRLLAGDT
GKVMIVGDDD QSIYGWRGAQ VENIQRFLND FPGAETIRLE QNYRSTSNIL SAANALIENN
NGRLGKKLWT DGADGEPISL YCAFNELDEA RFVVNRIKTW QDNGGALAEC AILYRSNAQS
RVLEEALLQA SMPYRIYGGM RFFERQEIKD ALSYLRLIAN RNDDAAFERV VNTPTRGIGD
RTLDVVRQTS RDRQLTLWQA CRELLQEKAL AGRAASALQR FMELIDALAQ ETADMPLHVQ
TDRVIKDSGL RTMYEQEKGE KGQTRIENLE ELVTATRQFS YNEEDEDLMP LQAFLSHAAL
EAGEGQADTW QDAVQLMTLH SAKGLEFPQV FIVGMEEGMF PSQMSLDEGG RLEEERRLAY
VGVTRAMQKL TLTYAETRRL YGKEVYHRPS RFIGELPEEC VEEVRLRATV SRPVSHQRMG
TPMVENDSGY KLGQRVRHAK FGEGTIVNME GSGEHSRLQV AFQGQGIKWL VAAYARLETV
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