| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4178 |
|---|
| Symbol | |
|---|
| ID | 6142893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4276833 |
|---|
| End bp | 4277549 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641619001 |
|---|
| Product | flavin mononucleotide phosphatase |
|---|
| Protein accession | YP_001746129 |
|---|
| Protein GI | 170680482 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.044421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTT ACCGGCCTTT GGGGCGCATC TCGGCGCTCA CCTTTGACCT GGATGATACC
CTTTACGATA ACCGTCCGGT GATTTTGCGC ACCGAGCGAG AGGCGCTTAC CTTTGTGCAA
AATTATCATC CGGCGCTGCG CAGCTTCCAG AATGAAGATC TGCAACGCCT GCGCCAGGCG
GTACGGGAAG CGGAACCCGA GATTTATCAC GACGTGACGC GCTGGCGTTT TCGTTCGATT
GAACAAGCCA TGCTCGACGC CGGGCTGAGT GCCGAAGAAG CCAGTGCAGG CGCACACGCA
GCAATGATCA ACTTTGCCAA ATGGCGCAGC CGAATCGATG TCCCGCAGCA AACCCACGAC
ACCTTAAAAC AGCTGGCGAA GAAATGGCCG CTGGTGGCGA TCACCAACGG TAACGCCCAG
CCGGAGCTGT TTGGTTTAGG GGATTATTTT GAGTTTGTGT TGCGCGCTGG CCCGCACGGG
CGCTCAAAAC CGTTCAGCGA TATGTACTTC CTGGCGGCGG AAAAACTCAA CGTGCCGATC
GGCGAGATCT TACATGTCGG GGACGATCTC ACCACTGACG TGGGTGGGGC AATTCGCAGC
GGAATGCAGG CCTGTTGGAT CAGACCGGAA AATGGCGATC TGATGCAAAC CTGGGACAGC
CGTTTACTCC CGCATCTGGA AATTTCCCGG TTGGCATCTC TGACCTCGCT GATATAA
|
|---|
| Protein sequence | MRFYRPLGRI SALTFDLDDT LYDNRPVILR TEREALTFVQ NYHPALRSFQ NEDLQRLRQA
VREAEPEIYH DVTRWRFRSI EQAMLDAGLS AEEASAGAHA AMINFAKWRS RIDVPQQTHD
TLKQLAKKWP LVAITNGNAQ PELFGLGDYF EFVLRAGPHG RSKPFSDMYF LAAEKLNVPI
GEILHVGDDL TTDVGGAIRS GMQACWIRPE NGDLMQTWDS RLLPHLEISR LASLTSLI
|
|---|
| |