| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4177 |
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| Symbol | xerC |
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| ID | 6147476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4275937 |
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| End bp | 4276833 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619000 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001746128 |
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| Protein GI | 170683603 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0208532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TACACACCGA TGTAGAACGC TACCTACGTT ATCTGAGCGT GGAGCGTCAG
CTTAGCCCGA TAACCCTACT TAACTATCAG CGTCAGCTTG AGGCGATCAT CAATTTTGCC
AGTGAAAACG GCCTGCAAAG CTGGCAGCAA TGTGATGTGA CGATGGTGCG CAATTTCGCT
GTACGCAGCC GCCGTAAAGG GCTGGGAGCT GCAAGTCTGG CGTTACGGCT TTCTGCGCTA
CGTAGCTTTT TTGACTGGCT GGTCAGCCAG AACGAACTCA AAGCCAACCC GGCGAAAGGT
GTGTCGGCAC CGAAAGCGCC GCGTCATCTG CCGAAAAACA TCGACGTCGA TGATATGAAT
CGGCTGCTGG ATATTGATAT CAACGATCCC CTCGCCGTGC GCGATCGGGC AATGCTGGAA
GTGATGTACG GCGCGGGGCT GCGTCTTTCC GAACTGGTGG GGCTCGATAT CAAACACCTC
GACCTGGAGT CCGGCGAAGT GTGGGTGATG GGGAAAGGCA GCAAAGAGCG CCGCCTGCCG
ATTGGTCGTA ACGCCGTGGC GTGGATTGAG CACTGGCTTG ATTTGCGCGA CCTGTTTGGC
AGCGAAGACG ACGCGCTTTT CCTGTCGAAA CTGGGCAAGC GTATCTCCGC GCGTAATGTG
CAAAAACGCT TTGCCGAATG GGGAATAAAA CAGGGGCTGA ATAATCACGT TCACCCGCAT
AAATTACGTC ACTCGTTCGC TACGCATATG CTGGAGTCGA GCGGCGATCT TCGTGGTGTG
CAGGAGCTGC TGGGTCATGC CAACCTCTCC ACCACGCAAA TCTATACTCA TCTTGATTTT
CAACACCTTG CCTCGGTGTA CGATGCGGCG CATCCACGCG CCAAACGGGG GAAATAA
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| Protein sequence | MTDLHTDVER YLRYLSVERQ LSPITLLNYQ RQLEAIINFA SENGLQSWQQ CDVTMVRNFA
VRSRRKGLGA ASLALRLSAL RSFFDWLVSQ NELKANPAKG VSAPKAPRHL PKNIDVDDMN
RLLDIDINDP LAVRDRAMLE VMYGAGLRLS ELVGLDIKHL DLESGEVWVM GKGSKERRLP
IGRNAVAWIE HWLDLRDLFG SEDDALFLSK LGKRISARNV QKRFAEWGIK QGLNNHVHPH
KLRHSFATHM LESSGDLRGV QELLGHANLS TTQIYTHLDF QHLASVYDAA HPRAKRGK
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