Gene EcSMS35_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4176 
Symbol 
ID6143231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4275233 
End bp4275940 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content56% 
IMG OID641618999 
Producthypothetical protein 
Protein accessionYP_001746127 
Protein GI170683253 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0299074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC CAGGGGAAGA ACTGCAGGAA ACACTCACGG AGCTTGATGA CCGGGCGGTT 
GTCGATTATC TGATTAAAAA TCCTGAGTTT TTTATCCGCA ATGCGCGCGC AGTTGAAGCG
ATACGTGTGC CGCATCCGGT ACGCGGCACC GTTTCGTTGG TCGAATGGCA CATGGCCCGC
GCACGTAATC ACATTCATGT TCTGGAAGAG AACATGGCGT TGTTGATGGA ACAGGCTATT
GCCAACGAAG GCCTGTTTTA TCGTCTACTC TACCTGCAGC GCAGTCTCAC CGCCGCCAGC
AGTCTCGATG ATATGCTGAT GCGCTTTCAC CGCTGGGCGC GCGATCTCGG CCTGGCGGGT
GCGAGCCTAC GCCTGTTCCC GGATCGCTGG CGTTTAGGTG CGCCGTCGAA CCACACTCAT
CTGGCATTAA GCCGTCAGTC TTTCGAACCG CTGCGTATTC AGCGTCTGGG GCAGGAACAG
CACTATCTGG GGCCACTTAA CGGACCGGAG CTTCTGGTGG TGCTACCGGA AGCGAAAGCG
GTGGGATCGG TGGCGATGTC GATGCTGGGA AGCGATGCTG ATTTGGGTGT CGTGCTGTTT
ACCAGTCGCG ATGCCAGTCA CTATCAACAA GGGCAGGGAA CGCAGTTACT TCATGAAATT
GCGCTGATGT TGCCGGAGCT TCTGGAGCGT TGGATTGAAC GCGTATGA
 
Protein sequence
MKQPGEELQE TLTELDDRAV VDYLIKNPEF FIRNARAVEA IRVPHPVRGT VSLVEWHMAR 
ARNHIHVLEE NMALLMEQAI ANEGLFYRLL YLQRSLTAAS SLDDMLMRFH RWARDLGLAG
ASLRLFPDRW RLGAPSNHTH LALSRQSFEP LRIQRLGQEQ HYLGPLNGPE LLVVLPEAKA
VGSVAMSMLG SDADLGVVLF TSRDASHYQQ GQGTQLLHEI ALMLPELLER WIERV