| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4160 |
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| Symbol | |
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| ID | 6142956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4260534 |
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| End bp | 4261919 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618983 |
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| Product | putative transport protein YifK |
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| Protein accession | YP_001746115 |
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| Protein GI | 170680511 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000124284 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA ACAAACCAGA GCTACAGCGT GGGCTGGAGG CTCGACATAT CGAACTCATC
GCCCTGGGGG GCACCATTGG CGTCGGCCTG TTTATGGGGG CCGCCAGTAC CCTGAAATGG
GCCGGGCCAT CCGTATTGTT GGCCTATATC ATCGCCGGGC TATTCGTCTT TTTCATCATG
CGTTCAATGG GCGAAATGTT GTTCCTCGAA CCTGTTACCG GTTCGTTCGC CGTTTATGCG
CATCGTTATA TGAGCCCGTT TTTTGGCTAT CTCACCGCCT GGTCTTACTG GTTTATGTGG
ATGGCGGTGG GGATCTCAGA AATCACCGCC ATTGGCGTTT ATGTCCAGTT CTGGTTCCCG
GAGATGGCGC AATGGATACC GGCATTGATC GCGGTGGCGC TGGTAGCATT GGCGAATCTG
GCGGCGGTGC GGTTGTACGG CGAAATCGAG TTCTGGTTTG CGATGATCAA AGTCACCACG
ATTATCGTGA TGATTGTCAT TGGCCTGGGC GTGATTTTCT TTGGCTTTGG CAATGGCGGG
CAGTCGATTG GTTTTAGCAA TCTCACAGAG CATGGCGGTT TCTTTGCGGG GGGCTGGAAA
GGGTTCCTGA CCGCGCTGTG TATTGTGGTG GCGTCCTACC AGGGCGTGGA GCTGATTGGC
ATTACTGCCG GTGAAGCGAA GAATCCGCAG GTGACGCTGC GCAGTGCCGT AGGCAAGGTG
CTGTGGCGAA TCCTGATTTT CTACGTAGGC GCGATTTTCG TTATCGTCAC CATCTTCCCG
TGGAATGAAA TAGGCAGCAA CGGCAGCCCG TTCGTACTGA CTTTCGCCAA AATCGGCATT
ACCGCAGCGG CGGGTATTAT CAACTTTGTG GTGCTGACGG CTGCGCTCTC TGGCTGTAAC
AGCGGCATGT ACAGTTGCGG ACGTATGCTC TACGCACTGG CGAAAAACCG TCAGTTACCG
GCGGCAATGG CGAAAGTTTC CCGTCACGGC GTACCGGTTG CGGGTGTGGC AGTATCTATT
GCTATCCTGT TAATTGGCTC ATGCCTGAAC TACATCATTC CCAATCCGCA GCGTGTGTTT
GTCTACGTCT ACAGTGCCAG CGTGCTTCCG GGGATGGTGC CATGGTTTGT GATATTGATA
AGCCAGCTGC GTTTTCGTCG TGCGCATAAA GCGGCGATTG CCAGCCATCC GTTCCGCTCA
ATCCTGTTCC CGTGGGCCAA CTACGTAACA ATGGCATTCC TGATTTGCGT TTTGATCGGC
ATGTACTTTA ATGAAGATAC GCGTATGTCG CTGTTTGTCG GCATCATCTT TATGCTGGCG
GTGACGGCGA TTTATAAAAT TTTTGGGCTT AATCGCCACG GTAAAGCGCA TAAACTGGAG
GAATAA
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| Protein sequence | MADNKPELQR GLEARHIELI ALGGTIGVGL FMGAASTLKW AGPSVLLAYI IAGLFVFFIM
RSMGEMLFLE PVTGSFAVYA HRYMSPFFGY LTAWSYWFMW MAVGISEITA IGVYVQFWFP
EMAQWIPALI AVALVALANL AAVRLYGEIE FWFAMIKVTT IIVMIVIGLG VIFFGFGNGG
QSIGFSNLTE HGGFFAGGWK GFLTALCIVV ASYQGVELIG ITAGEAKNPQ VTLRSAVGKV
LWRILIFYVG AIFVIVTIFP WNEIGSNGSP FVLTFAKIGI TAAAGIINFV VLTAALSGCN
SGMYSCGRML YALAKNRQLP AAMAKVSRHG VPVAGVAVSI AILLIGSCLN YIIPNPQRVF
VYVYSASVLP GMVPWFVILI SQLRFRRAHK AAIASHPFRS ILFPWANYVT MAFLICVLIG
MYFNEDTRMS LFVGIIFMLA VTAIYKIFGL NRHGKAHKLE E
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