| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4155 |
|---|
| Symbol | wecE |
|---|
| ID | 6145995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4254793 |
|---|
| End bp | 4255923 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641618978 |
|---|
| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
|---|
| Protein accession | YP_001746110 |
|---|
| Protein GI | 170681601 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAT TTAACGCACC GCCGGTGGTG GGAACCGAAC TCGACTATAT GCAGTCGGCA
ATGGGTAGCG GCAAACTGTG CGGCGATGGT GGTTTTACCC GTCGCTGCCA GCAGTGGCTG
GAGCAACGTT TTGGCAGCGC CAAAGTGTTA CTGACGCCAT CCTGCACCGC TTCGCTGGAG
ATGGCGGCGC TGCTGCTCGA TATCCAGCCT GGCGATGAAG TGATCATGCC GAGCTACACC
TTTGTCTCCA CCGCCAATGC CTTTGTGCTG CGTGGCGCAA AAATCGTTTT TGTGGATGTT
CGCCCGGACA CCATGAACAT CGACGAAACG CTGATTGAAG CGGCGATCAC CGACAAAACG
CGCGTTATCG TGCCGGTTCA TTACGCGGGT GTGGCCTGCG AAATGGACAC TATTATGGCG
TTGGCGAAGA AGCATAATCT ATTTGTGGTG GAAGATGCCG CTCAGGGCGT GATGTCCACT
TACAAAGGGC GTGCACTGGG AACCATTGGT CATATTGGCT GCTTTAGCTT CCATGAAACC
AAAAACTACA CGGCGGGCGG TGAAGGCGGC GCGACGCTGA TTAACGATAA AGCGTTGATC
GAACGAGCCG AGATCATCCG TGAAAAAGGC ACAAACCGCA GCCAGTTCTT CCGTGGTCAG
GTCGATAAAT ATACCTGGCG CGATATTGGC TCCAGCTATT TGATGTCCGA TCTGCAAGCA
GCGTACCTTT GGGCGCAACT GGAAGCCGCT GAACGTATCA ATCAGCAGCG TCTGGCGCTG
TGGCAAAACT ACTACGATGC GTTAGCGCCT CTGGCGAAAG CCGGGCGTAT CGAGCTGCCG
TCGATTCCCG ATGGCTGCGT GCAGAACGCG CATATGTTCT ACATTAAACT GCGGGATATT
GATGACCGGA GCGCGTTGAT TAACTTTCTG AAAGAAGCGG AAATCATGGC GGTGTTCCAT
TACATTCCGC TGCACGGTTG CCCTGCGGGG GAGCGCTTTG GTGAGTTCCA CGGTGAAGAT
CGCTACACCA CCAAAGAGAG CGAGCGCCTG CTGCGCCTGC CGTTGTTCTA CAACCTGTCG
CCCGTCAATC AGCGTACGGT AATTGCGACC TTGTTGAACT ACTTCTCCTG A
|
|---|
| Protein sequence | MIPFNAPPVV GTELDYMQSA MGSGKLCGDG GFTRRCQQWL EQRFGSAKVL LTPSCTASLE
MAALLLDIQP GDEVIMPSYT FVSTANAFVL RGAKIVFVDV RPDTMNIDET LIEAAITDKT
RVIVPVHYAG VACEMDTIMA LAKKHNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET
KNYTAGGEGG ATLINDKALI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA
AYLWAQLEAA ERINQQRLAL WQNYYDALAP LAKAGRIELP SIPDGCVQNA HMFYIKLRDI
DDRSALINFL KEAEIMAVFH YIPLHGCPAG ERFGEFHGED RYTTKESERL LRLPLFYNLS
PVNQRTVIAT LLNYFS
|
|---|
| |