| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4152 |
|---|
| Symbol | rfbB2 |
|---|
| ID | 6143553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4252169 |
|---|
| End bp | 4253236 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618975 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_001746107 |
|---|
| Protein GI | 170683610 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA TTCTGATAAC AGGTGGTGCC GGGTTTATTG GCTCGGCGCT GGTGCGTTAT
ATCATCAACG AAACGAGCGA CGCGGTGGTA GTGGTCGATA AGCTGACCTA CGCCGGAAAT
CTGATGTCGC TGGCACCGGT CGCGCAAAGC GAGCGCTTTG CCTTTGAGAA AGTTGATATC
TGCGATCGGG CAGAACTGGC GCGCGTATTC ACTGAGCATC AGCCAGACTG TGTCATGCAT
CTGGCAGCCG AAAGCCATGT TGACCGTTCT ATTGACGGCC CGGCAGCGTT TATTGAAACC
AACATTGTCG GGACTTATAC ATTGCTTGAA GCGGCGCGGA CTTACTGGAA TGCGCTGACG
GAAGATAAAA AATCAGCGTT CCGTTTTCAT CATATCTCCA CCGACGAAGT ATATGGTGAC
CTGCACTCGA CGGATGATTT CTTCACCGAA ACCACGCCGT ATGCGCCGAG CAGCCCTTAT
TCCGCTTCAA AAGCCAGCAG TGACCATCTG GTACGCGCCT GGCTGCGGAC CTATGGTCTG
CCGACGCTTA TCACCAACTG CTCGAATAAC TACGGCCCTT ACCACTTTCC GGAAAAACTG
ATCCCGCTGA TGATCCTCAA CGCGCTGGCG GGTAAACCGC TGCCGGTATA TGGCAACGGG
CAGCAAATCC GTGACTGGCT GTATGTTGAA GATCACGCCC GCGCGCTGTA TTGCGTGGCG
ACCACCGGGA AAGTCGGTGA AACCTATAAT ATTGGTGGTC ACAACGAGCG TAAGAATCTC
GATGTTGTGG AAACCATTTG CGAGCTGCTG GAAGAACTGG CTCCGAACAA GCCGCACGGC
GTGGCGCACT ATCGTGACCT GATCACCTTT GTCGCTGACC GTCCGGGGCA TGATCTGCGT
TATGCCATTG ATGCTTCGAA AATTGCCCGT GAACTTGGCT GGCTGCCGCA GGAAACCTTT
GAAAGTGGAA TGCGTAAAAC GGTGCAGTGG TATCTGGCTA ATGAAAGCTG GTGGAAGCAG
GTGCAGGACG GCAGCTATCA GGGCGAGCGT TTAGGTCTGA AAGGCTAA
|
|---|
| Protein sequence | MRKILITGGA GFIGSALVRY IINETSDAVV VVDKLTYAGN LMSLAPVAQS ERFAFEKVDI
CDRAELARVF TEHQPDCVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARTYWNALT
EDKKSAFRFH HISTDEVYGD LHSTDDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL
PTLITNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYCVA
TTGKVGETYN IGGHNERKNL DVVETICELL EELAPNKPHG VAHYRDLITF VADRPGHDLR
YAIDASKIAR ELGWLPQETF ESGMRKTVQW YLANESWWKQ VQDGSYQGER LGLKG
|
|---|
| |