| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4142 |
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| Symbol | rep |
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| ID | 6146748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4240324 |
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| End bp | 4242345 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618965 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001746097 |
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| Protein GI | 170680827 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.11002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTAA ACCCCGGCCA ACAACAAGCT GTCGAATTCG TTACCGGCCC CTGCCTGGTG
CTGGCAGGCG CGGGTTCCGG TAAAACTCGT GTCATCACCA ATAAAATCGC CCATCTGATC
CGCGGTTGCG GTTATCAGGC GCGACATATC GCGGCGGTGA CCTTTACCAA TAAGGCGGCG
CGCGAGATGA AAGAGCGTGT CGGGCAGACG CTGGGGCGCA AAGAGGCGCG CGGGCTGATG
ATTTCCACCT TCCACACGCT GGGGCTGGAT ATCATCAAGC GTGAGTATGC GGCGTTGGGG
ATGAAAGCGA ACTTTTCGCT GTTTGATGAC ACCGATCAGC TGGCGTTGCT TAAAGAGCTG
ACCGAGGGGC TGATTGAAGA TGACAAAGTC CTCCTGCAAC AGCTGATTTC GACCATCTCT
AACTGGAAGA ACGATCTCAA AACACCGTCC CAGGCGGCAG CCAGTGCGAT TGGCGAGCGG
GACCGTATTT TTGCCCATTG TTATGGGCTG TATGATGCAC ACCTGAAAGC CTGTAACGTT
CTCGACTTCG ATGATCTGAT TTTATTGCCG ACGTTACTGC TGCAACGCAA TGAAGAAGTC
CGCGAGCGCT GGCAGAACAA AATTCGCTAC CTGCTGGTGG ATGAGTATCA GGACACCAAC
ACCAGCCAGT ATGAACTGGT GAAACTGCTG GTGGGCAGCC GCGCGCGCTT TACCGTAGTT
GGCGATGACG ATCAGTCGAT CTACTCCTGG CGCGGTGCAC GTCCGCAAAA CCTGGTGCTG
TTGAGTCAGG ATTTCCCGGC ACTGAAGGTG ATTAAGCTTG AGCAGAACTA CCGCTCTTCC
GGACGTATTC TGAAAGCGGC GAACATCCTG ATCGCCAATA ACCCGCACGT CTTTGAAAAG
CGTCTGTTCT CCGAACTGGG CTATGGCGCG GAGCTAAAAG TTTTAAGCGC GAATAACGAA
GAACATGAAG CCGAGAGAGT CACCGGCGAG CTGATCGCGC ATCACTTCGT CAATAAAACG
CAGTACAAAG ATTACGCCAT TCTTTATCGC GGCAACCATC AGTCGCGGGT GTTTGAAAAA
TTCCTGATGC AAAACCGCAT CCCGTACAAA ATTTCTGGTG GTACGTCGTT TTTCTCTCGC
CCTGAAATCA AGGATTTGCT GGCTTATCTG CGCGTGCTGA CTAACCCGGA CGATGACAGC
GCATTCCTGC GTATCGTTAA CACGCCGAAG CGAGAGATTG GCCCGGCTAC GCTGAAAAAG
CTGGGTGAGT GGGCGATGAC GCGCAATAAA AGCATGTTTA CCGCCAGCTT TGATATGGGC
CTGAGTCAGA CGCTTAGCGG ACGTGGTTAT GAAGCATTGA CCCGCTTCAC TCACTGGTTG
GCAGAAATCC AGCGCCTGGC GGAGCGAGAG CCGATTGCCG CGGTGCGTGA TCTGATTCAC
GGCATGGATT ATGAATCCTG GCTGTACGAA ACATCGCCCA GCCCGAAAGC CGCCGAAATG
CGCATGAAGA ACGTCAACCA ACTGTTTAGC TGGATGACGG AGATGCTCGA AGGCAGTGAA
CTGGATGAGC CGATGACGTT AACCCAGGTG GTGACGCGCT TTACTTTGCG CGACATGATG
GAGCGTGGTG AGAGTGAAGA AGAGCTGGAT CAGGTGCAAC TGATGACTCT CCACGCGTCG
AAAGGGCTGG AGTTTCCTTA TGTCTACATG GTCGGTATGG AAGAAGGGTT TTTGCCGCAC
CAGAGCAGCA TCGATGAAGA TAATATCGAT GAGGAGCGGC GGCTGGCCTA TGTCGGCATT
ACCCGCGCCC AGAAGGAATT GACCTTTACG CTGTGTAAAG AACGCCGTCA GTACGGCGAA
CTGGTGCGCC CGGAGCCGAG CCGCTTTTTG CTGGAGCTGC CGCAGGATGA TCTGATTTGG
GAACAGGAGC GCAAAGTGGT CAGCGCCGAA GAACGGATGC AGAAAGGGCA AAGCCATCTG
GCGAATCTGA AAGCGATGAT GGCGGCAAAA CGAGGGAAAT AA
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| Protein sequence | MRLNPGQQQA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RGCGYQARHI AAVTFTNKAA
REMKERVGQT LGRKEARGLM ISTFHTLGLD IIKREYAALG MKANFSLFDD TDQLALLKEL
TEGLIEDDKV LLQQLISTIS NWKNDLKTPS QAAASAIGER DRIFAHCYGL YDAHLKACNV
LDFDDLILLP TLLLQRNEEV RERWQNKIRY LLVDEYQDTN TSQYELVKLL VGSRARFTVV
GDDDQSIYSW RGARPQNLVL LSQDFPALKV IKLEQNYRSS GRILKAANIL IANNPHVFEK
RLFSELGYGA ELKVLSANNE EHEAERVTGE LIAHHFVNKT QYKDYAILYR GNHQSRVFEK
FLMQNRIPYK ISGGTSFFSR PEIKDLLAYL RVLTNPDDDS AFLRIVNTPK REIGPATLKK
LGEWAMTRNK SMFTASFDMG LSQTLSGRGY EALTRFTHWL AEIQRLAERE PIAAVRDLIH
GMDYESWLYE TSPSPKAAEM RMKNVNQLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM
ERGESEEELD QVQLMTLHAS KGLEFPYVYM VGMEEGFLPH QSSIDEDNID EERRLAYVGI
TRAQKELTFT LCKERRQYGE LVRPEPSRFL LELPQDDLIW EQERKVVSAE ERMQKGQSHL
ANLKAMMAAK RGK
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