Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4141 |
Symbol | ppiC |
ID | 6143201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4239223 |
End bp | 4239504 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641618964 |
Product | peptidyl-prolyl cis-trans isomerase C |
Protein accession | YP_001746096 |
Protein GI | 170682547 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0250797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA CAGCAGCAGC ACTGCATATC CTTGTAAAAG AAGAGAAACT GGCTCTGGAA CTTCTCGAGC AGATTAAGAA CGGTGCCGAT TTCGGCAAGC TGGCGAAGAA ACACTCCATT TGCCCGTCAG GTAAACGCGG TGGTGATTTA GGTGAATTCC GCCAGGGCCA GATGGTTCCG GCGTTCGATA AAGTGGTTTT CTCTTGTCCG GTACTGGAGC CAACCGGTCC GCTGCATACC CAGTTCGGGT ATCACATCAT TAAGGTGCTT TACCGTAACT AA
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Protein sequence | MAKTAAALHI LVKEEKLALE LLEQIKNGAD FGKLAKKHSI CPSGKRGGDL GEFRQGQMVP AFDKVVFSCP VLEPTGPLHT QFGYHIIKVL YRN
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