| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4140 |
|---|
| Symbol | ilvC |
|---|
| ID | 6146382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4237702 |
|---|
| End bp | 4239177 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618963 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001746095 |
|---|
| Protein GI | 170683905 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0447832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACT ACTTCAATAC ACTGAATCTG CGCCAGCAGC TGGCACAGCT GGGCAAATGT
CGCTTTATGG GGCGCGATGA ATTCGCCGAT GGCGCGAGCT ACCTTCAGGG TAAAAAAGTA
GTCATCGTCG GCTGTGGCGC ACAGGGTCTG AACCAGGGCC TGAACATGCG TGATTCTGGT
CTCGATATCT CCTACGCTCT GCGTAAAGAA GCGATTGCCG AAAAGCGCGC ATCCTGGCGT
AAAGCAACCG AAAATGGTTT TAAAGTGGGT ACTTACGAAG AACTGATCCC ACAGGCGGAT
CTGGTGGTTA ACCTGACGCC GGACAAGCAG CACTCTGATG TAGTGCGCAC CGTACAGCCA
CTGATGAAGG ACGGCGCGGC GCTGGGTTAC TCGCATGGTT TCAACATCGT GGAAGTAGGC
GAGCAGATCC GTAAAGACAT CACCGTAGTA ATGGTTGCGC CGAAATGCCC TGGCACCGAA
GTGCGTGAAG AGTACAAACG TGGATTCGGC GTACCGACGC TGATTGCCGT TCACCCGGAA
AACGATCCGA AAGGCGAAGG CATGGCGATC GCTAAAGCGT GGGCGGCGGC AACCGGTGGT
CATCGTGCGG GCGTGCTGGA ATCCTCTTTC GTTGCGGAAG TGAAATCTGA CCTGATGGGC
GAGCAAACCA TCCTGTGCGG TATGTTGCAG GCTGGCTCTC TGCTGTGCTT CGACAAACTG
GTGGAAGAAG GCACCGATCC GGCATACGCA GAAAAACTGA TTCAGTTCGG CTGGGAAACC
ATCACCGAAG CGCTGAAACA GGGCGGCATC ACGCTGATGA TGGACCGTCT CTCTAACCCG
GCGAAACTGC GTGCTTACGC GCTGTCTGAA CAGCTGAAAG AGATCATGGC GCCGCTGTTC
CAGAAACACA TGGATGACAT CATCTCCGGC GAATTCTCTT CCGGCATGAT GGCAGACTGG
GCCAACGACG ATAAGAAACT GCTGACCTGG CGTGAAGAGA CCGGCAAAAC CGCGTTCGAA
ACCGCGCCGC AGTATGAAGG CAAAATCGGC GAGCAGGAGT ACTTCGATAA AGGCGTACTG
ATGATCGCGA TGGTAAAAGC AGGCGTTGAG TTGGCGTTTG AAACCATGGT TGATTCCGGC
ATCATCGAAG AGTCTGCTTA CTATGAATCA CTGCACGAAC TGCCGCTGAT TGCCAACACT
ATCGCTCGTA AGCGTCTGTA CGAAATGAAC GTGGTTATCT CTGATACCGC CGAGTACGGT
AACTATCTGT TCTCTTACGC TTGTGTGCCG CTGCTGAAAC CGTTTATGGC AGAGCTGCAA
CCGGGCGACT TGGGTAAAGC TATTCCGGAA GGTGCGGTAG ATAACGCGCA GTTGCGTGAT
GTGAACGAAG CGATTCGCAG CCATGCGATT GAGCAGGTAG GTAAGAAACT GCGCGGCTAT
ATGACGGATA TGAAACGTAT TGCTGTTGCA GGTTAA
|
|---|
| Protein sequence | MANYFNTLNL RQQLAQLGKC RFMGRDEFAD GASYLQGKKV VIVGCGAQGL NQGLNMRDSG
LDISYALRKE AIAEKRASWR KATENGFKVG TYEELIPQAD LVVNLTPDKQ HSDVVRTVQP
LMKDGAALGY SHGFNIVEVG EQIRKDITVV MVAPKCPGTE VREEYKRGFG VPTLIAVHPE
NDPKGEGMAI AKAWAAATGG HRAGVLESSF VAEVKSDLMG EQTILCGMLQ AGSLLCFDKL
VEEGTDPAYA EKLIQFGWET ITEALKQGGI TLMMDRLSNP AKLRAYALSE QLKEIMAPLF
QKHMDDIISG EFSSGMMADW ANDDKKLLTW REETGKTAFE TAPQYEGKIG EQEYFDKGVL
MIAMVKAGVE LAFETMVDSG IIEESAYYES LHELPLIANT IARKRLYEMN VVISDTAEYG
NYLFSYACVP LLKPFMAELQ PGDLGKAIPE GAVDNAQLRD VNEAIRSHAI EQVGKKLRGY
MTDMKRIAVA G
|
|---|
| |