| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4123 |
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| Symbol | |
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| ID | 6143899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4220434 |
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| End bp | 4221126 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641618947 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001746085 |
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| Protein GI | 170681987 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000860554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0423809 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTAA GCGCACAACA GTTAGCTGCA CAGAAAAACC TTTCGTATGT TCTGGCTGAG
AAGCTGGCGC AACGCATCTT AAAAGGTGAA TATGAACCCG GCACCATTTT GCCTGGTGAG
ATTGAGCTGG GCGAGCAATT TGGAGTGAGT CGTACAGCGG TACGCGAAGC GGTCAAAACG
TTAACGGCAA AAGGGATGGT TTTACCGCGA CCGCGAATTG GTACCCGGGT CATGCCACAA
TCAAACTGGA ATTTTCTTGA TCAGGAATTG CTTACCTGGT GGATGACAGA AGAGAACTTT
CATCAGGTCA TCGATCACTT TCTGGTTATG CGTATCTGTC TGGAGCCGCA AGCTTGCCTA
CTGGCTGCAA CGGTTGGCAC CGCGGAACAG AAGGCGCATC TCAATACGTT AATGGCCGAA
ATGGTGGCAT TAAAAGAGAA CTTTCGCCGT GAACGCTGGA TTGAGGTCGA TATGGCCTGG
CATGAGCATA TCTATGAAAT GAGCGCCAAT CCGTTTTTGA CCTCATTCGC CTCGCTATTC
CATTCGGTTT ATCACACTTA CTTCACGTCA ATAACCAGCG ACACAGTGAT AAAGCTGGAT
CTGCACCAGG CGATTGTCGA TGCGATTATC CAAAGCGATG GCGACGCGGC ATTTAAAGCT
TGTCAGGCGC TGCTACGCTC ACCAGATAAG TGA
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| Protein sequence | MPLSAQQLAA QKNLSYVLAE KLAQRILKGE YEPGTILPGE IELGEQFGVS RTAVREAVKT
LTAKGMVLPR PRIGTRVMPQ SNWNFLDQEL LTWWMTEENF HQVIDHFLVM RICLEPQACL
LAATVGTAEQ KAHLNTLMAE MVALKENFRR ERWIEVDMAW HEHIYEMSAN PFLTSFASLF
HSVYHTYFTS ITSDTVIKLD LHQAIVDAII QSDGDAAFKA CQALLRSPDK
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