| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4120 |
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| Symbol | rbsK |
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| ID | 6145739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4217078 |
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| End bp | 4218022 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618944 |
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| Product | ribokinase |
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| Protein accession | YP_001746082 |
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| Protein GI | 170681947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.444588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.199768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATCC CGAATATGCA AAACGCAGGC AGCCTCGTTG TTCTTGGCAG CATTAATGCT
GACCACATTC TTAATCTTCA ATCTTTTCCT ACCCCAGGCG AAACCGTAAC CGGTAACCAC
TATCAGGTTG CATTTGGCGG CAAAGGCGCT AATCAGGCTG TGGCTGCTGG GCGTAGCGGT
GCGAATATCG CGTTTATTGC CTGCACTGGC GATGACAGCA TTGGTGAGAG CGTTCGCCAG
CAGCTCGCCA CTGATAACAT CGATATTTCT CCGGTCAGCG TGATCAAAGG CGAATCAACA
GGTGTGGCGC TGATTTTTGT TAATGGCGAA GGTGAGAATG TCATCGGTAT TCATGCCGGC
GCTAATGCTG CCCTTTCCCC GGCACTGGTG GAAGCGCAAC GTGAGCGTAT TGCCAACGCG
TCAGCATTAT TAATGCAGCT GGAATCACCA CTCGAAAGTG TGATGGCAGC GGCGAAAATC
GCCCATCAAA ATAAGACTAT CGTTGCGCTT AACCCGGCTC CGGCTCGCGA ACTTCCTGAC
GAACTGCTGG CACTGGTGGA CATTATTACG CCAAACGAAA CGGAAGCAGA AAAGCTCACC
GGTATTCGTG TTGAAAATGA TGAAGATGCA GCGAAGGCGG CGCAGGTACT GCATGAAAAA
GGTATCCGTA CTGTACTGAT TACTTTAGGA AGTCGTGGTG TATGGGCTAG CGTGAATGGT
GAAGGTCAGC GCGTTCCTGG ATTCCGGGTG CAGGCTGTCG ATACCATTGC TGCCGGAGAT
ACCTTTAACG GCGCGTTAAT CACGGCGTTG CTGGAAGAAA AACCATTGCC AGAGGCGATT
CGGTTTGCCC ATGCTGCCGC TGCGATTGCC GTAACACGTA AAGGCGCACA ACCTTCCGTA
CCGTGGCGTG AAGAGATCGA CGCATTTTTA GACAGGCAGA GGTGA
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| Protein sequence | MDIPNMQNAG SLVVLGSINA DHILNLQSFP TPGETVTGNH YQVAFGGKGA NQAVAAGRSG
ANIAFIACTG DDSIGESVRQ QLATDNIDIS PVSVIKGEST GVALIFVNGE GENVIGIHAG
ANAALSPALV EAQRERIANA SALLMQLESP LESVMAAAKI AHQNKTIVAL NPAPARELPD
ELLALVDIIT PNETEAEKLT GIRVENDEDA AKAAQVLHEK GIRTVLITLG SRGVWASVNG
EGQRVPGFRV QAVDTIAAGD TFNGALITAL LEEKPLPEAI RFAHAAAAIA VTRKGAQPSV
PWREEIDAFL DRQR
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