| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4116 |
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| Symbol | rbsD |
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| ID | 6147203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4213138 |
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| End bp | 4213569 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641618940 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_001746078 |
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| Protein GI | 170683192 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.197034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAAAA AAATGAAAAA AGGCACCGTT CTTAATTCTG ATATTTCATC GGTGATCTCC
CGTCTGGGAC ATACCGATAC GCTGGTGGTG TGTGATGCTG GTTTACCCAT CCCCAAAAGT
ACAACGCGTA TCGATATGGC ATTAACCCAG GGGGTACCTT CTTTTATGCA GGTGCTGGGC
GTCGTCACAA ATGAAATGCA GGTCGAAGCT GCCATTATCG CGGAAGAGAT CAAACAACAT
AATCCGCAAC TCCACGAAAC GTTGCTCACT CACCTTGAGC AGCTGCAAAA ACACCAGGGA
AATACCATTG AAATTCGTTA CACCACGCAT GAACAATTCA AACAACAAAC CGCAGAAAGT
CAGGCGGTAA TTCGCAGCGG AGAATGTTCT CCGTATGCGA ATATCATTCT CTGTGCTGGC
GTGACGTTCT GA
|
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| Protein sequence | MEKKMKKGTV LNSDISSVIS RLGHTDTLVV CDAGLPIPKS TTRIDMALTQ GVPSFMQVLG
VVTNEMQVEA AIIAEEIKQH NPQLHETLLT HLEQLQKHQG NTIEIRYTTH EQFKQQTAES
QAVIRSGECS PYANIILCAG VTF
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