Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4114 |
Symbol | |
ID | 6143270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4209396 |
End bp | 4210892 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641618938 |
Product | regulatory ATPase RavA |
Protein accession | YP_001746076 |
Protein GI | 170679686 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.972847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.113412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCACC CTCATTTATT AGCGGAAAGA ATTTCCCGCC TGAGCAGTTC GTTGGAAAAG GGGCTTTATG AACGTAGCCA CGCCATCCGC TTGTGTTTAT TAGCGGCATT AAGTGGTGAA AGTGTGTTCC TCCTTGGCCC GCCAGGTATT GCCAAAAGTT TGATCGCCCG GCGCTTAAAA TTCGCCTTTC AGAATGCCCG CGCGTTTGAA TATCTGATGA CTCGCTTCTC CACGCCGGAA GAGGTTTTTG GTCCCCTTTC TATTCAGGCG CTAAAAGATG AAGGGCGCTA TGAACGTTTA ACCAGCGGTT ACCTGCCGGA AGCAGAAATC GTCTTTCTGG ATGAGATCTG GAAAGCGGGT CCGGCAATTC TTAATACCCT GCTCACCGCC ATTAACGAGC GCCAGTTCCG CAACGGTGCA CACATAGAAA AAATCCCGAT GCGCCTGCTG GTGGCGGCCT CCAACGAGCT GCCGGAAGCA GACAGCAGTC TGGAAGCGTT ATATGACCGC ATGCTGATTC GTCTGTGGTT AGATAAAGTG CAGGATAAAG CGAATTTCCG CTCCATGCTG ACCAGTCAAC AGGATGAAAA CGACAATCCG GTTCCTACCT CCTTGCAGGT CACAGATGAA GAATATGAAC GCTGGCAGAA AGAGATTGGT GAAATTACGC TGCCCGATCA TGTATTTGAG CTGATTTTTA TGCTGCGCCA GCAACTGGAT AAATTACCGG ATGCGCCTTA TGTCTCGGAT CGTCGCTGGA AAAAAGCGAT TCGATTATTG CAGGCCAGCG CCTTTTTTAG CGGTCGCAGT GCTGTTGCCC CGGTTGATCT CATTTTGCTG AAAGATTGCC TGTGGTATGA CGCGCAAAGC CTGAATTTGA TACAACAACA AATCGATGTA TTGATGACCG GTCATGCCTG GCAACAGCAA GGGATGTTGA CCCGCCTGGG CGCGATTGTG CAACGTCACC TGCAACTACA GCAGCAACAA AGCGATAAAA CAGCCTTAAC GGTAATTCGT CTGGGCGGCA TTTTCAGCCG TCGTCAGCAG TATCAACTCC CTGTTAACGT TACTGCTTCC ACTCTGACTC TGCTGCTGCA AAAACCGTTA AAACTGCATG ATATGGAAGT GGTTCATATC ACCTTTGAGC GTAGCGCGCT GGAACAGTGG CTGAGCAAAG GTGGTGAAAT TCGCGGCAAA CTAAACGGTA TCGGCTTTGC CCAGAAACTG AATCTGGAAG TTGATAGCAC CCAACATCTT GTTGTACGCG ATGTAAGTTT ACAAGGCAGT ACGCTGGCAC TTCCCGGTTC ATCGGCTGAA GGTCTGCCAG GTGAAATAAA ACAACAACTG GAAGAGCTTG AAAGCGACTG GCGCAAGCAA CACGCTTTAT TCAGCGAACA GCAAAAATGT CTGTTTATCC CTGGCGACTG GTTAGGTCGC ATTGAAGCCA GCCTACAGGA TGTCGGTGCA CAGATTCGCC AGGCGCAACA ATGCTAA
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Protein sequence | MAHPHLLAER ISRLSSSLEK GLYERSHAIR LCLLAALSGE SVFLLGPPGI AKSLIARRLK FAFQNARAFE YLMTRFSTPE EVFGPLSIQA LKDEGRYERL TSGYLPEAEI VFLDEIWKAG PAILNTLLTA INERQFRNGA HIEKIPMRLL VAASNELPEA DSSLEALYDR MLIRLWLDKV QDKANFRSML TSQQDENDNP VPTSLQVTDE EYERWQKEIG EITLPDHVFE LIFMLRQQLD KLPDAPYVSD RRWKKAIRLL QASAFFSGRS AVAPVDLILL KDCLWYDAQS LNLIQQQIDV LMTGHAWQQQ GMLTRLGAIV QRHLQLQQQQ SDKTALTVIR LGGIFSRRQQ YQLPVNVTAS TLTLLLQKPL KLHDMEVVHI TFERSALEQW LSKGGEIRGK LNGIGFAQKL NLEVDSTQHL VVRDVSLQGS TLALPGSSAE GLPGEIKQQL EELESDWRKQ HALFSEQQKC LFIPGDWLGR IEASLQDVGA QIRQAQQC
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