| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4088 |
|---|
| Symbol | phoU |
|---|
| ID | 6146985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4181528 |
|---|
| End bp | 4182253 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641618912 |
|---|
| Product | transcriptional regulator PhoU |
|---|
| Protein accession | YP_001746050 |
|---|
| Protein GI | 170683229 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTC TCAATCTTAA TAAACATATT TCCGGCCAGT TCAACGCCGA ACTGGAAAGT
ATCCGCACGC AGGTGATGAC CATGGGCGGC ATGGTGGAGC AGCAGCTTTC TGATGCAATC
ACCGCGATGC ATAACCAGGA CAGCGATCTG GCGAAGCGCG TCATCGAAGG CGACAAGAAC
GTCAACATGA TGGAAGTGGC GATCGATGAA GCTTGCGTGC GCATTATCGC CAAACGTCAG
CCGACGGCGA GCGACCTGCG TCTGGTTATG GTGATCAGTA AAACCATTGC CGAGCTGGAG
CGTATTGGCG ACGTGGCGGA CAAAATCTGC CGTACTGCGC TGGAGAAATT CTCCCAGCAG
CATCAGCCGT TGCTGGTAAG TCTGGAGTCG CTGGGCCGTC ATACCATCCA GATGCTGCAC
GACGTGCTGG ACGCGTTCGC GCGGATGGAC ATTGACGAAG CGGTACGTAT TTATCGGGAA
GATAAAAAAG TCGATCAGGA GTACGAAGGT ATTGTTCGTC AACTGATGAC CTACATGATG
GAAGATTCGC GCACCATTCC GAGCGTACTT ACCGCGCTAT TCTGTGCGCG TTCAATCGAA
CGTATCGGCG ACCGCTGCCA GAATATTTGT GAGTTTATCT TCTACTACGT GAAGGGGCAG
GATTTCCGTC ATGTAGGCGG TGATGAGCTG GATAAACTGC TGGCCGGAAA AGACCCGAAA
GAGTAA
|
|---|
| Protein sequence | MDSLNLNKHI SGQFNAELES IRTQVMTMGG MVEQQLSDAI TAMHNQDSDL AKRVIEGDKN
VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM VISKTIAELE RIGDVADKIC RTALEKFSQQ
HQPLLVSLES LGRHTIQMLH DVLDAFARMD IDEAVRIYRE DKKVDQEYEG IVRQLMTYMM
EDSRTIPSVL TALFCARSIE RIGDRCQNIC EFIFYYVKGQ DFRHVGGDEL DKLLAGKDPK
E
|
|---|
| |