Gene EcSMS35_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4079 
Symbol 
ID6145726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4170549 
End bp4171298 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content52% 
IMG OID641618903 
Producthypothetical protein 
Protein accessionYP_001746041 
Protein GI170682229 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.995337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTC ACTTTGCCCG AGGGATTTTA ACGGAAGGAC ATCTGATTTC TGTTCGTCTC 
CCCTCCCAGT GTCATCAAGA AGCCCGAAAC ATTCCCCCTC ATCGTCAAAG CCGTTTTCTG
GCGTCCAGAG GTTTACTCGC AGAACTGATG TTCATGCTGT ATGGCATTGG CGAATTGCCG
GAAATCGTCA CCCTGCCGAA AGGAAAACCG GTTTTCAGCG ATAAAAATTT GCCTTCGTTT
TCTATTTCCT ATGCCGGGAA TATGGTCGGC GTGGCGTTAA CAACCGAAGG TGAATGTGGC
CTCGATATGG AACTGCAGCG TGCGACGCGC GGGTTTCATA GCCCACACGC GCCCGATAAC
CACACCTTTT CCAGCAATGA ATCGCTATGG ATCAGTAAAC AAAACGATCC TAACGAAGCG
CGGGCGCAGC TCATCACGCT GCGCCGAAGC GTGCTAAAAC TAACCGGTGA TGTTTTGAAT
GACGATCCGC GCGATCTGCA ACTACTGCCC ATTGCCGGAC GCCTGAAATG TGCTCATGTA
AATCATGTAG AAGCGTTATG CGACGCGGAG GACGTGCTGG TGTGGTCCGT GTCGGTCACG
CCCACGATTG AAAAGCTCAG TGTCTGGGAG TTAGATGGCA AACACGGCTG GAAAAGCCTG
CCCGATATTC ACAGCCGCGC CAACAATCCT ACCAGCCGGA TGATGCGTTT TGCCCAGCTC
TCTACCGTGA AGGCTTTTTC GCCATATTGA
 
Protein sequence
MATHFARGIL TEGHLISVRL PSQCHQEARN IPPHRQSRFL ASRGLLAELM FMLYGIGELP 
EIVTLPKGKP VFSDKNLPSF SISYAGNMVG VALTTEGECG LDMELQRATR GFHSPHAPDN
HTFSSNESLW ISKQNDPNEA RAQLITLRRS VLKLTGDVLN DDPRDLQLLP IAGRLKCAHV
NHVEALCDAE DVLVWSVSVT PTIEKLSVWE LDGKHGWKSL PDIHSRANNP TSRMMRFAQL
STVKAFSPY