Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4067 |
Symbol | dnaA |
ID | 6146687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4158994 |
End bp | 4160397 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618892 |
Product | chromosomal replication initiation protein |
Protein accession | YP_001746030 |
Protein GI | 170679718 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000102031 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGATTGC AGGATGAGTT ACCAGCCACA GAATTCAGTA TGTGGATACG CCCATTGCAG GCGGAACTGA GCGATAACAC GCTGGCCCTG TACGCGCCAA ACCGTTTTGT CCTCGATTGG GTACGGGACA AGTACCTTAA TAATATCAAT GGACTGCTAA CCAGTTTCTG CGGAGCGGAT GCCCCACAGC TGCGTTTTGA AGTCGGCACC AAACCGGTGA CGCAAACGCC ACAAGCGGCA GTGACGAGCA ACGTCGCGGC CCCTGCACAG GTGGCGCAAA CGCAGCCGCA ACGTGCTGCG CCTTCTACGC GCTCGGGTTG GGATAACGTC CCGGCTCCGG CAGAACCGAC CTATCGTTCT AACGTAAACG TCAAACACAC GTTTGATAAC TTCGTTGAAG GTAAATCTAA CCAACTGGCG CGCGCGGCGG CTCGCCAGGT GGCAGATAAC CCTGGCGGTG CTTATAACCC GTTGTTCCTT TATGGCGGCA CGGGTTTGGG TAAAACTCAC CTGCTGCATG CGGTGGGTAA CGGCATTATG GCGCGCAAGC CGAATGCCAA AGTGGTTTAT ATGCACTCCG AGCGCTTTGT TCAGGACATG GTTAAAGCCC TGCAAAACAA CGCGATCGAA GAGTTTAAAC GCTACTACCG TTCCGTAGAT GCACTGCTGA TCGACGATAT TCAGTTTTTT GCTAATAAAG AACGATCTCA GGAAGAGTTT TTCCACACCT TCAACGCCCT GCTGGAAGGT AATCAACAGA TCATTCTCAC CTCCGATCGC TATCCGAAAG AGATCAACGG CGTTGAGGAT CGTTTGAAAT CCCGCTTCGG CTGGGGACTG ACTGTGGCGA TCGAACCGCC AGAGCTGGAA ACCCGCGTGG CGATCCTGAT GAAAAAGGCC GACGAAAACG ACATTCGTTT GCCGGGCGAA GTGGCGTTCT TTATCGCCAA GCGTCTACGA TCTAACGTAC GTGAGCTGGA AGGCGCGCTG AACCGCGTTA TTGCTAACGC CAACTTTACC GGACGTGCGA TCACCATCGA CTTCGTGCGT GAGGCGCTGC GCGACTTGCT GGCATTGCAG GAAAAACTGG TCACCATCGA CAATATTCAG AAGACGGTGG CGGAGTACTA CAAGATCAAA GTCGCGGATC TCCTTTCCAA GCGTCGATCC CGCTCGGTGG CGCGTCCGCG CCAGATGGCG ATGGCGCTGG CAAAAGAACT GACTAACCAC AGTCTGCCGG AGATTGGCGA TGCGTTTGGT GGCCGTGACC ACACGACGGT GCTTCATGCC TGCCGTAAGA TCGAGCAGCT GCGTGAAGAG AGCCACGATA TCAAAGAAGA TTTTTCCAAT TTAATCAGAA CATTGTCATC GTAA
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Protein sequence | MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN GLLTSFCGAD APQLRFEVGT KPVTQTPQAA VTSNVAAPAQ VAQTQPQRAA PSTRSGWDNV PAPAEPTYRS NVNVKHTFDN FVEGKSNQLA RAAARQVADN PGGAYNPLFL YGGTGLGKTH LLHAVGNGIM ARKPNAKVVY MHSERFVQDM VKALQNNAIE EFKRYYRSVD ALLIDDIQFF ANKERSQEEF FHTFNALLEG NQQIILTSDR YPKEINGVED RLKSRFGWGL TVAIEPPELE TRVAILMKKA DENDIRLPGE VAFFIAKRLR SNVRELEGAL NRVIANANFT GRAITIDFVR EALRDLLALQ EKLVTIDNIQ KTVAEYYKIK VADLLSKRRS RSVARPRQMA MALAKELTNH SLPEIGDAFG GRDHTTVLHA CRKIEQLREE SHDIKEDFSN LIRTLSS
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