Gene EcSMS35_4066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4066 
SymboldnaN 
ID6143496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4157889 
End bp4158989 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content54% 
IMG OID641618891 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001746029 
Protein GI170682488 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0145467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CCGTAGAACG TGAGCATTTA TTAAAACCGC TACAACAGGT GAGCGGGCCG 
TTAGGTGGTC GTCCTACGCT ACCGATTCTC GGTAATCTGC TGTTACAGGT TGCTGACGGT
ACGTTGTCGC TGACCGGTAC TGATCTCGAG ATGGAAATGG TGGCACGCGT TGCGCTGGTT
CAGCCACACG AACCAGGGGC GACGACCGTT CCAGCGCGCA AATTCTTTGA TATCTGCCGT
GGTCTGCCTG AAGGCGCAGA AATTGCCGTG CAGCTGGAAG GTGAGCGGAT GCTGGTGCGC
TCCGGGCGTA GCCGTTTTTC GCTGTCTACC CTGCCAGCGG CGGATTTCCC GAATCTTGAT
GACTGGCAGA GCGAAGTCGA ATTTACCCTG CCGCAGGCGA CGATGAAGCG TCTGATTGAA
GCGACCCAGT TTTCTATGGC GCATCAGGAC GTTCGCTATT ACTTAAACGG TATGCTGTTC
GAAACTGAAG GTGAAGAACT GCGCACCGTG GCGACCGATG GTCACCGTCT GGCGGTCTGT
TCAATGCCAA TTGGTCAATC TTTGCCAAGC CATTCGGTGA TCGTGCCGCG TAAAGGCGTG
ATTGAACTGA TGCGTATGCT CGACGGCGGC GACAATCCGC TGCGCGTGCA GATTGGCAGC
AACAACATTC GCGCCCACGT TGGCGACTTT ATCTTCACCT CGAAACTGGT GGATGGTCGC
TTCCCGGATT ACCGTCGTGT TCTGCCGAAG AATCCGGACA AACATCTCGA AGCAGGGTGC
GATCTGCTCA AGCAGGCGTT TGCCCGTGCG GCGATCCTCT CTAACGAGAA ATTCCGCGGC
GTGCGTCTGT ATGTCAGCGA AAATCAGCTG AAAATCACCG CCAATAACCC GGAACAGGAA
GAAGCGGAAG AGATCCTCGA CGTTACCTAT AGCGGTGCGG AGATGGAAAT CGGCTTCAAT
GTCAGCTATG TGCTGGATGT TCTGAACGCG CTGAAATGCG AAAACGTCCG CATGATGCTG
ACCGATTCGG TTTCCAGCGT GCAGATTGAA GATGCCGCAT CACAGTCGGC TGCCTATGTT
GTCATGCCAA TGAGACTGTA A
 
Protein sequence
MKFTVEREHL LKPLQQVSGP LGGRPTLPIL GNLLLQVADG TLSLTGTDLE MEMVARVALV 
QPHEPGATTV PARKFFDICR GLPEGAEIAV QLEGERMLVR SGRSRFSLST LPAADFPNLD
DWQSEVEFTL PQATMKRLIE ATQFSMAHQD VRYYLNGMLF ETEGEELRTV ATDGHRLAVC
SMPIGQSLPS HSVIVPRKGV IELMRMLDGG DNPLRVQIGS NNIRAHVGDF IFTSKLVDGR
FPDYRRVLPK NPDKHLEAGC DLLKQAFARA AILSNEKFRG VRLYVSENQL KITANNPEQE
EAEEILDVTY SGAEMEIGFN VSYVLDVLNA LKCENVRMML TDSVSSVQIE DAASQSAAYV
VMPMRL