Gene EcSMS35_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4062 
SymbolyidA 
ID6144509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4152904 
End bp4153716 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content51% 
IMG OID641618887 
Productsugar phosphatase 
Protein accessionYP_001746025 
Protein GI170683176 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA AACTCATTGC TATCGATATG GATGGCACCC TTCTGCTGCC CGATCACACC 
ATTTCACCCG CCGTTAAAAA TGCGATTGCC GCAGCTCGCG CCCGTGGCGT GAATGTCGTG
CTGACGACGG GTCGCCCTTA TGCAGGTGTT CACAATTACC TGAAAGAGCT GCATATGGAA
CAGCCGGGCG ACTACTGCAT TACTTATAAC GGCGCGCTGG TACAGAAGGC CGCTGATGGT
AGCACCGTGG CGCAAACCGC TCTCAGCTAT GACGACTACC GTTTCCTGGA AAAACTCTCT
CGCGAAGTCG GTTCTCATTT CCACGCCCTG GACCGCACCA CGCTGTACAC CGCCAACCGA
GATATCAGCT ACTACACGGT GCATGAATCT TTCGTTGCCA CCATTCCACT GGTGTTCTGC
GAAGCGGAGA AAATGGACCC CAATACCCAG TTCCTGAAAG TGATGATGAT TGATGAACCC
GCCATCCTCG ACCAGGCCAT TGCGCGTATT CCGCAGGAAG TGAAAGAAAA ATACACCGTG
CTGAAAAGTG CGCCGTACTT CCTCGAAATC CTCGATAAAC GCGTTAACAA AGGTACGGGT
GTGAAATCAC TGGCCGACGT GTTAGGTATT AAACCGGAAG AAATCATGGC GATTGGCGAT
CAGGAAAACG ACATCGCAAT GATTGAATAC GCAGGTGTTG GTGTGGCAAT GGATAACGCT
ATTCCTTCGG TGAAAGAAGT GGCGAACTTT GTCACCAAAT CCAACCTGGA AGATGGCGTG
GCGTTTGCTA TTGAGAAGTA TGTGCTGAAT TAA
 
Protein sequence
MAIKLIAIDM DGTLLLPDHT ISPAVKNAIA AARARGVNVV LTTGRPYAGV HNYLKELHME 
QPGDYCITYN GALVQKAADG STVAQTALSY DDYRFLEKLS REVGSHFHAL DRTTLYTANR
DISYYTVHES FVATIPLVFC EAEKMDPNTQ FLKVMMIDEP AILDQAIARI PQEVKEKYTV
LKSAPYFLEI LDKRVNKGTG VKSLADVLGI KPEEIMAIGD QENDIAMIEY AGVGVAMDNA
IPSVKEVANF VTKSNLEDGV AFAIEKYVLN