Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4060 |
Symbol | dgoR_1 |
ID | 6146357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4151236 |
End bp | 4151925 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641618885 |
Product | galactonate operon transcriptional repressor |
Protein accession | YP_001746023 |
Protein GI | 170682667 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTCA ATAAAACCGA TCGCATTGTC ATTACGCTGG GTAAACAGAT CGTTCACGGC AAATACGTAC CAGGCTCTCC ACTTCCGGCT GAGGCGGAGC TCTGTGAAGA GTTTGCAACC TCGCGCAACA TCATCCGTGA GGTGTTCCGT TCGCTGATGG CGAAGCGGCT GATTGAAATG AAACGTTATC GCGGGGCGTT TGTGGCACCG CGTAATCAGT GGAATTACCT CGATACTGAC GTGCTGCAAT GGGTGCTGGA AAACGACTAC GACCCACGGC TTATCAGTGC AATGAGCGAA GTGCGAAATC TGGTGGAACC GGCGATTGCC CGTTGGGCGG CAGAGCGCGC GACTTCCAGC GATCTGGCGC AGATTGAATC AGCGCTGAAC GAGATGATTG CCAACAATCA GGACCGCGAA GCGTTTAACG AAGCGGATAT TCGCTACCAC GAGGCGGTGC TGCAGTCGGT GCATAACCCG GTGTTACAGC AACTTAGCAT TGCGATCAGT TCGCTGCAGC GGGCGGTTTT TGAACGAACC TGGATGGGCG ATGAGGCCAA CATGCCGCAA ACGCTCCAGG AACATAAGGC GCTGTTTGAT GCGATACGGC ATCAGGACGG CGATGCGGCA GAGCAGGCGG CGCTTACCAT GATCGCCAGC TCGACACGAA GGTTAAAGGA AATCACATGA
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Protein sequence | MTLNKTDRIV ITLGKQIVHG KYVPGSPLPA EAELCEEFAT SRNIIREVFR SLMAKRLIEM KRYRGAFVAP RNQWNYLDTD VLQWVLENDY DPRLISAMSE VRNLVEPAIA RWAAERATSS DLAQIESALN EMIANNQDRE AFNEADIRYH EAVLQSVHNP VLQQLSIAIS SLQRAVFERT WMGDEANMPQ TLQEHKALFD AIRHQDGDAA EQAALTMIAS STRRLKEIT
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