Gene EcSMS35_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4058 
Symbol 
ID6147148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4149760 
End bp4150377 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID641618883 
Product2-dehydro-3-deoxy-6-phosphogalactonate aldolase 
Protein accessionYP_001746021 
Protein GI170681080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGGC AAACTAAACT CCCGCTGATC GCCATTTTGC GCGGCATTAC GCCCGACGAG 
GCGCTGGCGC ATGTTGGCGC GGTGATTGAC GCCGGGTTCG ACGCGGTTGA AATCCCGCTG
AATTCCCCTC AATGGGAGAA AAGCATTCCC GCCATCGTTG ATGCATACGG CGATAAGGCG
TTGATTGGCG CAGGTACGGT ACTGAAACCT GAACAGGTCG ATGCACTCGC CAGGATGGGC
TGCCAGCTCA TCGTTACGCC CAATATCCAT AGTGAAGTGA TCCGCCGTGC GGTGGGCTAC
GGCATGACCG TTTGCCCCGG CTGCGCGACG GCGACCGAAG CCTTTACCGC GCTCGAAGCG
GGCGCGCAGG CGCTGAAAAT ATTCCCGTCA TCGGCTTTTG GGCCGCAATA CATCAAAGCG
TTAAAAGCGG TATTACCGCA GGACATCCCG GTCTTTGCCG TAGGCGGTGT GACGCCAGAA
AACCTGGCGC AGTGGATAGA CGCAGGTTGT GCAGGGGCGG GCTTAGGCAG CGATCTCTAT
CGCGCCGGGC AGTCCGTAGA ACGCACCGCG CAGCAGGCAG CAGCATTTGT TAAGGCGTAT
CGAGAGGCAG TGCAATGA
 
Protein sequence
MQWQTKLPLI AILRGITPDE ALAHVGAVID AGFDAVEIPL NSPQWEKSIP AIVDAYGDKA 
LIGAGTVLKP EQVDALARMG CQLIVTPNIH SEVIRRAVGY GMTVCPGCAT ATEAFTALEA
GAQALKIFPS SAFGPQYIKA LKAVLPQDIP VFAVGGVTPE NLAQWIDAGC AGAGLGSDLY
RAGQSVERTA QQAAAFVKAY REAVQ