Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4058 |
Symbol | |
ID | 6147148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4149760 |
End bp | 4150377 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641618883 |
Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
Protein accession | YP_001746021 |
Protein GI | 170681080 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTGGC AAACTAAACT CCCGCTGATC GCCATTTTGC GCGGCATTAC GCCCGACGAG GCGCTGGCGC ATGTTGGCGC GGTGATTGAC GCCGGGTTCG ACGCGGTTGA AATCCCGCTG AATTCCCCTC AATGGGAGAA AAGCATTCCC GCCATCGTTG ATGCATACGG CGATAAGGCG TTGATTGGCG CAGGTACGGT ACTGAAACCT GAACAGGTCG ATGCACTCGC CAGGATGGGC TGCCAGCTCA TCGTTACGCC CAATATCCAT AGTGAAGTGA TCCGCCGTGC GGTGGGCTAC GGCATGACCG TTTGCCCCGG CTGCGCGACG GCGACCGAAG CCTTTACCGC GCTCGAAGCG GGCGCGCAGG CGCTGAAAAT ATTCCCGTCA TCGGCTTTTG GGCCGCAATA CATCAAAGCG TTAAAAGCGG TATTACCGCA GGACATCCCG GTCTTTGCCG TAGGCGGTGT GACGCCAGAA AACCTGGCGC AGTGGATAGA CGCAGGTTGT GCAGGGGCGG GCTTAGGCAG CGATCTCTAT CGCGCCGGGC AGTCCGTAGA ACGCACCGCG CAGCAGGCAG CAGCATTTGT TAAGGCGTAT CGAGAGGCAG TGCAATGA
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Protein sequence | MQWQTKLPLI AILRGITPDE ALAHVGAVID AGFDAVEIPL NSPQWEKSIP AIVDAYGDKA LIGAGTVLKP EQVDALARMG CQLIVTPNIH SEVIRRAVGY GMTVCPGCAT ATEAFTALEA GAQALKIFPS SAFGPQYIKA LKAVLPQDIP VFAVGGVTPE NLAQWIDAGC AGAGLGSDLY RAGQSVERTA QQAAAFVKAY REAVQ
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