Gene EcSMS35_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4054 
Symbol 
ID6145230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4144827 
End bp4146041 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content55% 
IMG OID641618879 
Producthypothetical protein 
Protein accessionYP_001746017 
Protein GI170681741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TAACCTTTGC TCCCCGTAAT CACCTGCTCA CCAATACCAA TACCTGGACG 
CCCGACAGCC AGTGGCTGGT ATTTGACGTG CGTCCTTCTG GCGCGTCGTT TACCGGCGAG
ACCATTGAGC GTGTGAATAT CCATACCGGC GAGGTCGAGG TTATCTATCG CGCGTCACAG
GGCGCGTACG TCGGCGTGGT GACCGTTCAT CCGAAGTCAG AGAAATATGT TTTCATCCAC
GGCCCGGAAA ATCCTGATGA AACATGGTAT TACGACTTCC ATCATCGGCG TGGAGTGATT
GTTGAAGGCG GCAAGGTGAG CAATCTCGAT GCAATGGATA TTACCGCGCC GTACACCCCA
GGAGCACTGC GCGGCGGCAG CCATGTGCAT GTCTTTAGCC CGAACGGTGA AAGGGTGAGC
TTTACCTATA ACGACCATGT AATGCATCAA CTCGATTCGG CGCTGGATTT GCGAAACGTC
GGCGTGGCTG CACCGTTTGG CCCGGTCAAC GTACAAAAGC AGCATCCGCG TGAATACAGC
GGTAGCCACT GGTGCGTGCT GGTGAGTAAA ACCACGCCCA CGCCGCAGCC TGGCAGCGAT
GAAATCAATC GTGCTTATGA AGAAGGATGG GTAGGAAATC ACGCGCTGGC GTTTATTGGC
GACACACTTT CGCCAAAGGG CGAGAAAGTG CCGGAGCTAT TTATCGTTGA GTTACCGCAA
GATGAAGCTG GCTGGAAAGC GGCAGGTGAT GCGCCGTTAA GTGGAACGGA AACAACCCTG
CCCGCGCCAC CGCGTGGCGT CGTGCAGCGA CGTTTAACCT TTACCCACCA TCGGGCTTAT
CCGGGGTTAG TCAACGTCCC GCGCCACTGG GTGCGCTGTA ATCCGCAGGG TACGCAAATC
GCGTTTTTAA TGCGTGATGA TAACGGCATT GTGCAACTGT GGCTTATCTC GCCACAGGGC
GGCGAGCCGC GCCAGTTAAC CCATAACAAA ACGGATATTC AGTCTGCATT TAACTGGCAT
CCGTCAGGAG AATGGTTGGG CTTTGTGCTG GATAATCGAA TTGCTTGCGC CCATGCGCAA
AGCGGCGAGG TTGAGTATTT AACCGAAAAC CACGCCAATC CACCTTCTGC GGACGCCGTG
GTCTTCTCGC CGGATGGTCA ATGGCTGGCG TGGATGGAAG GTGGCCAGCT GTGGATCACC
GAAACTGATC GCTAA
 
Protein sequence
MKQITFAPRN HLLTNTNTWT PDSQWLVFDV RPSGASFTGE TIERVNIHTG EVEVIYRASQ 
GAYVGVVTVH PKSEKYVFIH GPENPDETWY YDFHHRRGVI VEGGKVSNLD AMDITAPYTP
GALRGGSHVH VFSPNGERVS FTYNDHVMHQ LDSALDLRNV GVAAPFGPVN VQKQHPREYS
GSHWCVLVSK TTPTPQPGSD EINRAYEEGW VGNHALAFIG DTLSPKGEKV PELFIVELPQ
DEAGWKAAGD APLSGTETTL PAPPRGVVQR RLTFTHHRAY PGLVNVPRHW VRCNPQGTQI
AFLMRDDNGI VQLWLISPQG GEPRQLTHNK TDIQSAFNWH PSGEWLGFVL DNRIACAHAQ
SGEVEYLTEN HANPPSADAV VFSPDGQWLA WMEGGQLWIT ETDR