| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4046 |
|---|
| Symbol | |
|---|
| ID | 6144970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4136540 |
|---|
| End bp | 4137433 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641618870 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001746008 |
|---|
| Protein GI | 170679673 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAA AATTGCAAAG TTCGGATGTA AAAAACGAAA CTCCGTACAA TATTCCCTTA
TTGATTAACG AAAATGTGAT CTCCAGCGGA ATTTCTCTGA TCTCGCTCTG GCATACCTAC
GCCGACGAGC ATTACCGGGT GATCTGGCCG CGGGACAAGA AGAAACCGCT TATCGCCAAC
TCATGGGTTG CGGTGTATAC CGTACAAGGA TGTGGGAAAA TTATTTTAAA GAATGGTGAA
CAAATAACAC TGCATGGCAA CTGTATTATA TTTTTAAAGC CAATGGATAT TCACTCTTAT
CACTGTGAAG GTTTAGTATG GGAACAGTAC TGGATGGAAT TTACCCCAAC CAGTATGATG
GATATTCCCG TTGGTCAGCA AAGCGTTATT TATAATGGCG AAATTTATAA TCAGGAACTC
ACCGAAGTTG CTGAGTTAAT AACTTCACCA GAAGCAATAA AAAATAATCT GGCAGTCGCT
TTTCTGACGA AAATTATTTA TCAGTGGATT TGTCTTATGT ACGCAGACGG TAAAAAAGAT
CCACAACGGC GGCAAATTGA AAATTTAATT GCCACTTTAC ATGCCAGTCT GCAACAACGC
TGGAGCGTAG CTGATATGGC TGCCACGATC CCCTGTAGCG AAGCCTGGTT GCGTCGTCTG
TTTTTACGCT ATACCGGCAA GACGCCGAAA GAATATTACC TCGATGCGCG TCTGGATCTG
GCGCTATCGC TATTAAAACA ACAAGGAAAC TCGGTTGGCG AAGTCGCTGA TACGCTCAAC
TTCTTCGACT CCTTTCATTT CAGCAAAGCC TTTAAAAATA AATTTGGTTA TGCGCCGTCA
GCTGTGCTGA AGAATACGGA CCAGCACCCA ACGGATGCCA GTCCACACAA TTAA
|
|---|
| Protein sequence | MNGKLQSSDV KNETPYNIPL LINENVISSG ISLISLWHTY ADEHYRVIWP RDKKKPLIAN
SWVAVYTVQG CGKIILKNGE QITLHGNCII FLKPMDIHSY HCEGLVWEQY WMEFTPTSMM
DIPVGQQSVI YNGEIYNQEL TEVAELITSP EAIKNNLAVA FLTKIIYQWI CLMYADGKKD
PQRRQIENLI ATLHASLQQR WSVADMAATI PCSEAWLRRL FLRYTGKTPK EYYLDARLDL
ALSLLKQQGN SVGEVADTLN FFDSFHFSKA FKNKFGYAPS AVLKNTDQHP TDASPHN
|
|---|
| |