| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4044 |
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| Symbol | |
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| ID | 6145768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4134658 |
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| End bp | 4136373 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618869 |
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| Product | putative symporter YidK |
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| Protein accession | YP_001746007 |
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| Protein GI | 170680795 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.978949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGT TACAAATCTT GAGTTTTGTC GGTTTTACGC TGCTGGTGGC GATCATCACC
TGGTGGAAGG TTCGCAAAAC AGATACCGGA TCGCAACAAG GCTATTTTCT TGCCGGACGT
TCACTAAAAG CGCCGGTTAT TGCCGCTTCG TTAATGCTAA CCAACCTTTC CACGGAACAA
CTGGTTGGAC TTTCCGGGCA GGCCTACAAA AGCGGCATGT CGGTGATGGG CTGGGAAGTC
ACTTCTGCGG TGACGCTGAT CTTCCTCGCG CTAATCTTTT TACCGCGCTA TCTGAAGCGT
GGCATTGCCA CCATCCCCGA TTTCCTGGAG GAACGTTATG ATAAAACGAC GCGTATTATC
ATCGACTTCT GCTTCCTCAT TGCCACCGGT GTCTGCTTTC TGCCGATTGT TCTCTACTCC
GGCGCGTTGG CGCTCAACAG CCTGTTTCAC GTCGGGGAAT CGTTACAAAT TTCCCACGGT
GCGGCTATCT GGCTATTGGT AATTTTGCTT GGTCTGGCGG GAATTTTGTA TGCGGTGATC
GGCGGACTGC GCGCAATGGC AGTGGCGGAC TCCATCAACG GTATTGGGCT GGTTATTGGC
GGGTTGATGG TGCCGATATT TGGCCTGATC GCGATGGGCA AGGGCAGCTT TATGCAGGGC
ATTGAGCAAC TCACCACCGT TCACGCCGAG AAATTAAACT CAGTCGGTGG CCCGACCGAT
CCCTTGCCGA TTGGCGCGGC ATTTACCGGT TTGATTCTGG TGAACACCTT TTACTGGTGT
ACAAATCAGG GCATCGTGCA ACGCACGCTG GCGTCAAAAA GCCTGGCGGA AGGGCAAAAG
GGGGCGCTGT TAACGGCGGT GCTGAAAATG CTCGACCCGC TGGTACTGGT GCTGCCAGGG
TTGATTGCGT TTCATCTGTA TCAGGATTTA CCTAAAGCCG ACATGGCCTA CCCGACGCTG
GTCAATAACG TTCTGCCAGT GCCACTGGTG GGTTTCTTCG GCGCGGTGTT ATTTGGTGCG
GTGATCAGTA CCTTCAACGG CTTTCTGAAT AGCGCCAGTA CGTTATTCAG TATGGGTATT
TACCGGCGCA TCATTAACCA GAATGCCGAG CCGCAGCAGC TGGTCACCGT TGGGCGCAAA
TTTGGTTTCT TTATCGCCAT CGTTTCGGTG CTGGTCGCGC CGTGGATCGC CAACGCGCCG
CAGGGGCTGT ATAGCTGGAT GAAACAGCTC AACGGTATTT ACAACGTGCC GCTGGTTACC
ATCATCATTA TGGGCTTTTT CTTCCCGCGC ATCCCGGCGC TGGCGGCAAA AGTGGCGATG
GGGATTGGCA TAATCAGCTA CATCACCATC AACTATCTGG TGAAGTTCGA CTTCCATTTC
CTCTATGTGC TGGCCTGTAC GTTCTGCATC AACGTGGTCG TGATGCTGGT GATCGGTTTT
ATCAAACCGC GCGCCACGCC GTTCACCTTC AAAGATGCGT TTGCGGTGGA CATGAAACCG
TGGAAAAACG TCAAGATCGC GTCAATTGGC ATCCTGTTCG CTATGATTGG CGTCTATGCC
GGGCTGGCTG AATTCGGCGG CTACGGTACG CGCTGGTTAG CGATGATCAG TTATTTCATC
GCTGCCGTAG TGATTGTCTA CCTGATTTTT GACAGCTGGC GGCATCGTCA CGACCCAGCC
GTAACCTTTA CTCCCGACGC GAAGGATAGC CTATGA
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| Protein sequence | MNSLQILSFV GFTLLVAIIT WWKVRKTDTG SQQGYFLAGR SLKAPVIAAS LMLTNLSTEQ
LVGLSGQAYK SGMSVMGWEV TSAVTLIFLA LIFLPRYLKR GIATIPDFLE ERYDKTTRII
IDFCFLIATG VCFLPIVLYS GALALNSLFH VGESLQISHG AAIWLLVILL GLAGILYAVI
GGLRAMAVAD SINGIGLVIG GLMVPIFGLI AMGKGSFMQG IEQLTTVHAE KLNSVGGPTD
PLPIGAAFTG LILVNTFYWC TNQGIVQRTL ASKSLAEGQK GALLTAVLKM LDPLVLVLPG
LIAFHLYQDL PKADMAYPTL VNNVLPVPLV GFFGAVLFGA VISTFNGFLN SASTLFSMGI
YRRIINQNAE PQQLVTVGRK FGFFIAIVSV LVAPWIANAP QGLYSWMKQL NGIYNVPLVT
IIIMGFFFPR IPALAAKVAM GIGIISYITI NYLVKFDFHF LYVLACTFCI NVVVMLVIGF
IKPRATPFTF KDAFAVDMKP WKNVKIASIG ILFAMIGVYA GLAEFGGYGT RWLAMISYFI
AAVVIVYLIF DSWRHRHDPA VTFTPDAKDS L
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